| METHOD about: | ../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| METHOD quote: | L Jaroszewski, L Rychlewski, W Li, and A Godzik:: Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Science, 9, 232-241, 2000. |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for pdbblast are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |