| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_06 | THIS_month:psum | 3.8 | 2.9 | 9.3 | 14.3 | 17.6 | 46 | 1 | 22.7 | 25.6 | 143.1 | |
| fr | 2001_06 | 1gd5:A | 2.6 | 2.6 | -8.982353e+00 | -2.589484e+00 | 1.5e+00 | 3.1e+00 | 5.2e+01 | 1 | 1.7e+01 | 2.3e+01 | 130 |
| fr | 2001_06 | 1i82:A | 1.5 | 1.6 | -5.312155e+00 | -1.844559e+00 | 5.3e-01 | 3.2e+00 | 6.0e+01 | 1 | 9.0e+00 | 1.1e+01 | 189 |
| fr | 2001_06 | 1iah:B | 3.8 | 2.0 | -1.527000e+01 | -5.055815e-02 | 1.8e+00 | 3.2e+00 | 1.4e+01 | 1 | 1.1e+01 | 1.1e+01 | 280 |
| fr | 2001_06 | 1ibz:C | 6.7 | 4.6 | -9.022053e+00 | 1.379251e+01 | 3.9e+01 | 3.9e+01 | 4.3e+01 | 1 | 3.8e+01 | 3.9e+01 | 110 |
| fr | 2001_06 | 1ic0:B | 6.9 | 4.6 | -7.604078e+00 | 1.336172e+01 | 3.9e+01 | 3.9e+01 | 4.2e+01 | 1 | 3.9e+01 | 3.9e+01 | 111 |
| fr | 2001_06 | 1im3:D | 0.8 | 2.3 | -1.327826e+01 | -3.728365e+00 | 0.0e+00 | 6.3e+00 | 4.8e+01 | 1 | 1.5e+01 | 1.9e+01 | 95 |
| fr | 2001_06 | 1j7r:A | 6.7 | 3.7 | -1.085203e+01 | 6.518756e+00 | 3.2e+01 | 4.4e+01 | 7.1e+01 | 1 | 4.3e+01 | 4.7e+01 | 77 |
| fr | 2001_06 | 1j98:A | 1.9 | 2.0 | -2.045991e+00 | 3.721997e+00 | 6.5e-01 | 3.3e+00 | 3.8e+01 | 1 | 1.0e+01 | 1.6e+01 | 153 |
| fr | 2001_06 | THIS_month:psum | 3.8 | 2.9 | 9.3 | 14.3 | 17.6 | 46 | 1 | 22.7 | 25.6 | 143.1 | |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |