| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_07 | THIS_month:psum | 4.7 | 3.0 | 21.0 | 8.8 | 28.0 | 31.5 | 50 | 1 | 34.0 | 35.7 | 135.7 |
| fr | 2001_07 | 1e4t:A | 4.3 | 3.5 | 2.014054e+01 | 1.546415e+01 | 7.8e+01 | 8.1e+01 | 8.4e+01 | 1 | 7.8e+01 | 8.1e+01 | 37 |
| fr | 2001_07 | 1e5s:A | 1.9 | 1.2 | -1.002736e+01 | 1.705996e+00 | 1.5e+00 | 4.2e+00 | 2.2e+01 | 1 | 7.3e+00 | 8.5e+00 | 260 |
| fr | 2001_07 | 1f2v:A | 3.1 | 3.1 | -5.953394e+00 | 6.738840e-01 | 2.4e+00 | 3.3e+00 | 4.3e+01 | 1 | 2.1e+01 | 2.3e+01 | 209 |
| fr | 2001_07 | 1i5n:B | 2.1 | 2.6 | -9.391371e+00 | 7.726999e+00 | 4.2e+00 | 1.1e+01 | 5.4e+01 | 1 | 3.4e+01 | 3.5e+01 | 120 |
| fr | 2001_07 | 1ijy:A | 1.4 | 3.3 | -1.674121e+01 | -2.907345e+00 | 4.1e+00 | 1.1e+01 | 2.9e+01 | 1 | 2.0e+01 | 2.1e+01 | 122 |
| fr | 2001_07 | 1jc4:A | 7.6 | 3.3 | -7.351425e+00 | 7.079792e+00 | 2.4e+01 | 2.9e+01 | 6.0e+01 | 1 | 1.9e+01 | 2.2e+01 | 139 |
| fr | 2001_07 | 1jc5:B | 7.5 | 2.0 | 2.222551e+01 | 7.776216e+00 | 2.4e+01 | 2.8e+01 | 3.5e+01 | 1 | 1.1e+01 | 1.5e+01 | 147 |
| fr | 2001_07 | 1jei:A | 5.8 | 3.7 | 2.068348e+01 | 1.521994e+01 | 7.0e+01 | 7.2e+01 | 7.9e+01 | 1 | 7.2e+01 | 7.2e+01 | 53 |
| fr | 2001_07 | 1jfi:B | 9.2 | 4.9 | -1.018000e+01 | 1.549154e+01 | 4.4e+01 | 4.4e+01 | 4.4e+01 | 1 | 4.4e+01 | 4.4e+01 | 135 |
| fr | 2001_07 | THIS_month:psum | 4.7 | 3.0 | 21.0 | 8.8 | 28.0 | 31.5 | 50 | 1 | 34.0 | 35.7 | 135.7 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |