| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2002_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2002_07 | THIS_month:psum | 5.5 | 2.3 | 10.2 | 11.4 | 17.3 | 22.0 | 52.0 | 1 | 21.4 | 25 | 164 |
| fr | 2002_07 | 1iu1:A | 2.9 | 3.3 | -1.110545e+01 | 6.172799e-01 | 1.0e+01 | 1.8e+01 | 4.6e+01 | 1 | 2.9e+01 | 3.4e+01 | 120 |
| fr | 2002_07 | 1j5w:A | 1.3 | 0 | -9.521455e+00 | -9.945675e-01 | 0.0e+00 | 3.7e-01 | 2.4e+01 | 1 | 0.0e+00 | 0.0e+00 | 270 |
| fr | 2002_07 | 1kam:A | 14.8 | 2.8 | -4.906082e+00 | 1.627796e+01 | 4.7e+01 | 5.1e+01 | 6.9e+01 | 1 | 1.7e+01 | 2.5e+01 | 180 |
| fr | 2002_07 | 1kam:D | 5.0 | 2.6 | -8.100273e+00 | 8.743886e+00 | 2.0e+01 | 2.0e+01 | 3.6e+01 | 1 | 1.0e+01 | 1.1e+01 | 174 |
| fr | 2002_07 | 1kaq:F | 15.4 | 3.1 | -4.921796e+00 | 1.942800e+01 | 5.1e+01 | 5.9e+01 | 7.4e+01 | 1 | 1.9e+01 | 2.3e+01 | 167 |
| fr | 2002_07 | 1key:B | 0.8 | 0.0 | -2.036000e+01 | -2.680944e+00 | 2.3e+00 | 5.4e+00 | 1.4e+01 | 1 | 5.9e+00 | 1.1e+01 | 221 |
| fr | 2002_07 | 1kq2:A | 1.9 | 2.6 | -1.221600e+01 | -8.741821e+00 | 3.3e+00 | 1.3e+01 | 8.3e+01 | 1 | 3.0e+01 | 3.3e+01 | 60 |
| fr | 2002_07 | 1kq2:H | 1.3 | 2.0 | -1.272471e+01 | -8.964837e+00 | 0.0e+00 | 4.8e+00 | 7.7e+01 | 1 | 3.5e+01 | 3.7e+01 | 62 |
| fr | 2002_07 | 1kzq:A | 1.3 | 1.6 | -1.153032e+01 | 1.805273e+00 | 2.8e+00 | 4.7e+00 | 2.1e+01 | 1 | 9.9e+00 | 1.2e+01 | 253 |
| fr | 2002_07 | 1l3l:C | 2.3 | 2.3 | -8.145597e+00 | -1.951630e+00 | 4.1e+00 | 6.8e+00 | 3.2e+01 | 1 | 1.1e+01 | 1.3e+01 | 219 |
| fr | 2002_07 | 1lj2:A | 5.4 | 4.4 | -7.448780e+00 | 1.214215e+01 | 2.9e+01 | 3.2e+01 | 7.7e+01 | 1 | 3.3e+01 | 4.0e+01 | 106 |
| fr | 2002_07 | 1lvf:B | 8.6 | 3.7 | 1.024578e+01 | 1.903617e+01 | 2.2e+01 | 3.6e+01 | 8.7e+01 | 1 | 6.8e+01 | 7.2e+01 | 104 |
| fr | 2002_07 | 1m4v:A | 10.5 | 2.6 | -8.329535e+00 | 1.326016e+01 | 3.4e+01 | 3.5e+01 | 3.7e+01 | 1 | 1.1e+01 | 1.4e+01 | 196 |
| fr | 2002_07 | THIS_month:psum | 5.5 | 2.3 | 10.2 | 11.4 | 17.3 | 22.0 | 52.0 | 1 | 21.4 | 25 | 164 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |