| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2000_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2000_08 | THIS_month:psum | 6.4 | 3.6 | 12.8 | 5.7 | 19.3 | 23.2 | 37.1 | 1 | 23.5 | 26.3 | 248.8 |
| fr | 2000_08 | 1c3g:A | 1.2 | 2.8 | -1.696667e+01 | -3.278277e+00 | 2.4e+00 | 5.9e+00 | 2.1e+01 | 1 | 1.0e+01 | 1.2e+01 | 170 |
| fr | 2000_08 | 1eem:A | 21.4 | 5.5 | 3.415810e+00 | 1.615897e+01 | 5.8e+01 | 6.4e+01 | 7.4e+01 | 1 | 6.3e+01 | 6.7e+01 | 237 |
| fr | 2000_08 | 1eg3:A | 3.9 | 3.5 | -1.299521e+01 | -9.560538e-01 | 1.1e+01 | 1.1e+01 | 1.8e+01 | 1 | 1.1e+01 | 1.2e+01 | 260 |
| fr | 2000_08 | 1f2t:B | 9.6 | 4.4 | -5.873077e+00 | 8.008534e+00 | 4.1e+01 | 4.8e+01 | 7.3e+01 | 1 | 4.2e+01 | 4.5e+01 | 143 |
| fr | 2000_08 | 1f2u:C | 5.6 | 3.1 | 2.441239e+01 | 1.843431e+00 | 2.2e+01 | 2.8e+01 | 3.9e+01 | 1 | 2.3e+01 | 2.7e+01 | 148 |
| fr | 2000_08 | 1fa0:B | 1.8 | 3.3 | 1.073132e+01 | 1.216948e+00 | 9.8e-01 | 2.3e+00 | 9.8e+00 | 1 | 4.9e+00 | 6.5e+00 | 511 |
| fr | 2000_08 | 1fgx:B | 1.9 | 2.6 | -8.981692e+00 | 1.292911e+00 | 3.7e-01 | 3.3e+00 | 2.5e+01 | 1 | 1.1e+01 | 1.5e+01 | 273 |
| fr | 2000_08 | THIS_month:psum | 6.4 | 3.6 | 12.8 | 5.7 | 19.3 | 23.2 | 37.1 | 1 | 23.5 | 26.3 | 248.8 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |