| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_05 | THIS_month:psum | 5.1 | 2.0 | 1.7 | 11.3 | 20.2 | 22.7 | 47.5 | 1 | 18.5 | 20.9 | 174.2 |
| fr | 2001_05 | 1ezv:H | 10.1 | 4.6 | -9.254545e+00 | 3.312973e+01 | 8.6e+01 | 8.6e+01 | 8.9e+01 | 1 | 8.8e+01 | 8.8e+01 | 74 |
| fr | 2001_05 | 1g0s:B | 3.7 | 3.1 | -5.107924e+00 | 9.048513e-01 | 1.1e+01 | 1.3e+01 | 5.7e+01 | 1 | 1.2e+01 | 1.8e+01 | 202 |
| fr | 2001_05 | 1g8f:A | 5.4 | 2.0 | -8.517312e+00 | -3.097598e-01 | 5.9e-01 | 7.8e-01 | 1.4e+01 | 1 | 7.5e+00 | 8.8e+00 | 510 |
| fr | 2001_05 | 1g9o:A | 11.8 | 5.2 | -7.827556e+00 | 3.204112e+01 | 8.1e+01 | 8.1e+01 | 8.6e+01 | 1 | 8.1e+01 | 8.1e+01 | 91 |
| fr | 2001_05 | 1ga7:B | 3.7 | 3.1 | -5.136119e+00 | 1.068232e+00 | 1.1e+01 | 1.3e+01 | 5.7e+01 | 1 | 1.3e+01 | 1.9e+01 | 202 |
| fr | 2001_05 | 1hf2:A | 2.7 | 0.7 | -1.110545e+01 | -2.712684e+00 | 1.5e+00 | 3.1e+00 | 2.8e+01 | 1 | 1.2e+01 | 1.5e+01 | 196 |
| fr | 2001_05 | 1hf2:D | 1.3 | 2.3 | -8.482786e+00 | -2.974423e+00 | 0.0e+00 | 5.3e-01 | 3.8e+01 | 1 | 9.5e+00 | 1.3e+01 | 190 |
| fr | 2001_05 | 1i1d:C | 9.3 | 2.6 | -7.940031e+00 | 1.415369e+01 | 3.5e+01 | 3.9e+01 | 3.9e+01 | 1 | 1.2e+01 | 1.3e+01 | 155 |
| fr | 2001_05 | 1i1j:A | 1.1 | 1.6 | -7.632636e+00 | -5.054822e+00 | 2.8e+00 | 3.8e+00 | 7.5e+01 | 1 | 1.3e+01 | 2.1e+01 | 106 |
| fr | 2001_05 | 1i21:N | 9.3 | 0 | -9.943501e+00 | 1.579571e+01 | 3.8e+01 | 4.3e+01 | 4.3e+01 | 1 | 0.0e+00 | 0.0e+00 | 143 |
| fr | 2001_05 | 1i21:X | 8.9 | 0 | -1.053103e+01 | 1.243961e+01 | 3.5e+01 | 3.8e+01 | 4.0e+01 | 1 | 0.0e+00 | 0.0e+00 | 146 |
| fr | 2001_05 | 1i4d:A | 4.2 | 3.1 | 1.763498e+00 | 4.111665e+00 | 4.8e+00 | 8.5e+00 | 4.8e+01 | 1 | 2.6e+01 | 3.0e+01 | 188 |
| fr | 2001_05 | 1i4l:A | 3.5 | 3.5 | -4.860229e+00 | 4.606636e+00 | 5.9e+00 | 8.6e+00 | 4.7e+01 | 1 | 2.3e+01 | 2.5e+01 | 185 |
| fr | 2001_05 | 1i4t:A | 2.9 | 3.5 | -5.066679e+00 | 6.610891e+00 | 6.1e+00 | 8.9e+00 | 4.9e+01 | 1 | 2.3e+01 | 2.6e+01 | 180 |
| fr | 2001_05 | 1i9s:A | 8.7 | 0 | -1.013773e+01 | 8.783023e+00 | 2.2e+01 | 2.3e+01 | 3.2e+01 | 1 | 0.0e+00 | 0.0e+00 | 186 |
| fr | 2001_05 | 1ifq:A | 2.4 | 0 | -1.225746e+01 | 2.089301e+00 | 2.0e+01 | 3.0e+01 | 3.9e+01 | 1 | 0.0e+00 | 0.0e+00 | 124 |
| fr | 2001_05 | 1ihn:A | 1.5 | 0 | -1.071578e+01 | -2.154847e+00 | 3.6e+00 | 7.2e+00 | 5.1e+01 | 1 | 0.0e+00 | 0.0e+00 | 111 |
| fr | 2001_05 | 1ija:A | 1.4 | 2.0 | -1.745127e+01 | -2.567217e+00 | 0.0e+00 | 2.7e+00 | 2.4e+01 | 1 | 1.4e+01 | 2.0e+01 | 148 |
| fr | 2001_05 | THIS_month:psum | 5.1 | 2.0 | 1.7 | 11.3 | 20.2 | 22.7 | 47.5 | 1 | 18.5 | 20.9 | 174.2 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |