| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2000_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2000_12 | THIS_month:psum | 7.9 | 2.5 | 12.7 | 8.8 | 14.1 | 20.4 | 47.9 | 1 | 23.9 | 26.8 | 230.9 |
| fr | 2000_12 | 1eo1:A | 2.0 | 2.3 | -5.370517e+00 | -1.551895e+00 | 1.6e+00 | 4.0e+00 | 7.8e+01 | 1 | 2.6e+01 | 3.1e+01 | 124 |
| fr | 2000_12 | 1ewt:A | 2.2 | 0.7 | -2.106207e+01 | -1.057528e+00 | 1.1e+00 | 2.2e+00 | 6.4e+00 | 1 | 3.3e+00 | 4.2e+00 | 456 |
| fr | 2000_12 | 1f53:A | 0.6 | 0.7 | -1.607368e+01 | -5.715021e+00 | 2.4e+00 | 1.1e+01 | 4.5e+01 | 1 | 2.3e+01 | 2.9e+01 | 84 |
| fr | 2000_12 | 1f6d:A | 3.0 | 0 | -9.606461e+00 | 3.667995e-01 | 1.4e+00 | 3.0e+00 | 1.7e+01 | 1 | 0.0e+00 | 0.0e+00 | 366 |
| fr | 2000_12 | 1fpo:A | 9.1 | 4.6 | 2.101870e+01 | 8.310437e+00 | 3.0e+01 | 3.4e+01 | 7.0e+01 | 1 | 3.3e+01 | 3.5e+01 | 171 |
| fr | 2000_12 | 1fu1:A | 2.6 | 2.0 | 9.167475e+00 | 8.613865e+00 | 1.1e+00 | 1.7e+00 | 6.6e+01 | 1 | 1.6e+01 | 2.1e+01 | 174 |
| fr | 2000_12 | 1fxk:B | 3.6 | 3.1 | -2.001293e+01 | -2.380257e+00 | 9.5e-01 | 3.8e+00 | 2.8e+01 | 1 | 2.2e+01 | 2.4e+01 | 105 |
| fr | 2000_12 | 1g1l:A | 23.9 | 0 | -2.972122e+00 | 1.247003e+01 | 4.7e+01 | 6.1e+01 | 6.9e+01 | 1 | 0.0e+00 | 0.0e+00 | 283 |
| fr | 2000_12 | 1g23:A | 1.8 | 1.6 | -1.242512e+01 | -1.804167e+00 | 2.1e+00 | 3.5e+00 | 1.7e+01 | 1 | 7.3e+00 | 8.7e+00 | 289 |
| fr | 2000_12 | 1g3j:B | 1.6 | 2.0 | -2.036000e+01 | -1.489756e+01 | 4.9e+00 | 2.4e+01 | 7.3e+01 | 1 | 3.7e+01 | 4.4e+01 | 41 |
| fr | 2000_12 | 1g3l:A | 24.4 | 5.2 | 4.108202e+00 | 1.312033e+01 | 4.7e+01 | 6.2e+01 | 6.9e+01 | 1 | 5.7e+01 | 6.2e+01 | 292 |
| fr | 2000_12 | 1g3l:D | 24.5 | 5.2 | 1.662100e+01 | 1.332756e+01 | 4.6e+01 | 6.2e+01 | 6.9e+01 | 1 | 5.7e+01 | 6.2e+01 | 293 |
| fr | 2000_12 | 1g6q:1 | 9.6 | 4.6 | -4.066135e+00 | 7.318145e+00 | 1.2e+01 | 1.5e+01 | 4.4e+01 | 1 | 2.9e+01 | 3.1e+01 | 328 |
| fr | 2000_12 | 1g6q:5 | 9.6 | 4.6 | -3.928275e+00 | 7.383134e+00 | 1.3e+01 | 1.5e+01 | 4.5e+01 | 1 | 3.0e+01 | 3.1e+01 | 321 |
| fr | 2000_12 | 1gak:A | 1.1 | 2.0 | -1.970323e+01 | -3.020167e+00 | 2.2e+00 | 5.1e+00 | 2.3e+01 | 1 | 1.8e+01 | 2.0e+01 | 137 |
| fr | 2000_12 | THIS_month:psum | 7.9 | 2.5 | 12.7 | 8.8 | 14.1 | 20.4 | 47.9 | 1 | 23.9 | 26.8 | 230.9 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |