| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_11 | THIS_month:psum | 3.3 | 1.9 | 7.8 | 8.5 | 11.4 | 38.9 | 1 | 13.9 | 16.0 | 197.7 | |
| fr | 2001_11 | 1gl4:B | 10.0 | 3.7 | -8.602817e+00 | 2.712819e+01 | 5.7e+01 | 6.1e+01 | 8.0e+01 | 1 | 6.7e+01 | 6.9e+01 | 89 |
| fr | 2001_11 | 1gmw:A | 2.5 | 1.6 | -2.262222e+01 | -3.941271e+00 | 3.7e+00 | 9.0e+00 | 2.0e+01 | 1 | 1.1e+01 | 1.3e+01 | 134 |
| fr | 2001_11 | 1hcx:A | 2.0 | 2.0 | -9.116418e+00 | -4.634981e+00 | 4.7e+00 | 7.9e+00 | 5.3e+01 | 1 | 1.3e+01 | 1.8e+01 | 127 |
| fr | 2001_11 | 1hek:A | 1.6 | 0 | -7.483003e+00 | -1.910561e+00 | 3.5e+00 | 8.0e+00 | 7.1e+01 | 1 | 0.0e+00 | 0.0e+00 | 113 |
| fr | 2001_11 | 1hz4:A | 0.8 | 0 | -1.650253e+01 | -1.655018e+00 | 5.6e-01 | 1.4e+00 | 1.0e+01 | 1 | 0.0e+00 | 0.0e+00 | 356 |
| fr | 2001_11 | 1inl:A | 3.6 | 2.6 | -1.174001e+01 | -2.111130e-02 | 7.0e+00 | 8.8e+00 | 1.8e+01 | 1 | 7.7e+00 | 9.8e+00 | 285 |
| fr | 2001_11 | 1inl:D | 3.0 | 2.6 | -1.174615e+01 | -2.321967e-01 | 3.9e+00 | 7.4e+00 | 1.8e+01 | 1 | 7.4e+00 | 8.9e+00 | 282 |
| fr | 2001_11 | 1j90:A | 6.8 | 3.1 | -1.357130e+01 | 6.625133e+00 | 2.0e+01 | 2.1e+01 | 2.3e+01 | 1 | 2.2e+01 | 2.2e+01 | 195 |
| fr | 2001_11 | 1jfa:B | 1.4 | 3.1 | -7.531749e+00 | 2.123935e-01 | 1.1e+00 | 2.6e+00 | 2.3e+01 | 1 | 1.2e+01 | 1.5e+01 | 350 |
| fr | 2001_11 | 1jq3:A | 3.1 | 2.3 | -2.241742e+01 | -1.782974e+00 | 6.8e+00 | 8.1e+00 | 8.8e+00 | 1 | 8.1e+00 | 8.8e+00 | 295 |
| fr | 2001_11 | 1jwa:B | 7.5 | 3.9 | -4.088901e+00 | 6.963099e+00 | 1.4e+01 | 1.4e+01 | 3.6e+01 | 1 | 2.7e+01 | 2.9e+01 | 217 |
| fr | 2001_11 | 1jwy:B | 3.5 | 0.7 | -7.826758e+00 | 2.741315e+00 | 3.6e-01 | 2.5e+00 | 2.8e+01 | 1 | 5.3e+00 | 8.5e+00 | 281 |
| fr | 2001_11 | 1jyo:F | 1.7 | 2.3 | -1.327265e+01 | -5.830794e+00 | 9.6e-01 | 2.9e+00 | 4.4e+01 | 1 | 1.2e+01 | 1.6e+01 | 104 |
| fr | 2001_11 | 1jzw:A | 2.8 | 0 | -7.714652e+00 | 3.564784e+00 | 2.2e+00 | 7.3e+00 | 5.8e+01 | 1 | 0.0e+00 | 0.0e+00 | 137 |
| fr | 2001_11 | 1k5j:B | 1.8 | 2.3 | -1.001311e+01 | -2.604282e+00 | 7.3e+00 | 1.2e+01 | 6.4e+01 | 1 | 1.7e+01 | 2.0e+01 | 96 |
| fr | 2001_11 | 1kaf:E | 1.8 | 1.6 | -8.602817e+00 | -4.271312e+00 | 3.9e+00 | 9.7e+00 | 6.9e+01 | 1 | 1.3e+01 | 1.9e+01 | 103 |
| fr | 2001_11 | THIS_month:psum | 3.3 | 1.9 | 7.8 | 8.5 | 11.4 | 38.9 | 1 | 13.9 | 16.0 | 197.7 | |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |