| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2000_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2000_10 | THIS_month:psum | 2.8 | 2.4 | 19.1 | 7.4 | 16.8 | 19.2 | 51.8 | 1 | 24.5 | 28.5 | 149.4 |
| fr | 2000_10 | 1c4r:F | 2.0 | 2.0 | -8.483333e+00 | -2.185822e+00 | 1.1e+00 | 4.0e+00 | 4.1e+01 | 1 | 1.1e+01 | 1.4e+01 | 177 |
| fr | 2000_10 | 1d7d:A | 2.3 | 2.8 | -1.065039e+01 | 1.101969e+00 | 1.1e+00 | 2.7e+00 | 3.0e+01 | 1 | 1.0e+01 | 1.2e+01 | 185 |
| fr | 2000_10 | 1dgn:A | 9.3 | 4.1 | -7.200903e+00 | 9.930963e+00 | 6.2e+01 | 6.7e+01 | 6.9e+01 | 1 | 6.1e+01 | 6.3e+01 | 89 |
| fr | 2000_10 | 1ezf:A | 4.3 | 3.5 | -8.536093e+00 | -3.654534e-01 | 4.0e+00 | 5.9e+00 | 2.2e+01 | 1 | 9.3e+00 | 1.3e+01 | 323 |
| fr | 2000_10 | 1f3u:A | 1.3 | 2.0 | -9.396877e+00 | -4.806496e+00 | 0.0e+00 | 0.0e+00 | 5.5e+01 | 1 | 8.5e+00 | 1.6e+01 | 118 |
| fr | 2000_10 | 1f3u:H | 1.7 | 2.0 | -6.296541e+00 | -3.923005e+00 | 0.0e+00 | 7.6e-01 | 7.4e+01 | 1 | 1.3e+01 | 2.1e+01 | 131 |
| fr | 2000_10 | 1fl4:A | 1.6 | 1.2 | -4.952329e+00 | 9.321086e-01 | 1.6e+00 | 5.7e+00 | 6.4e+01 | 1 | 1.1e+01 | 2.1e+01 | 192 |
| fr | 2000_10 | 1fu9:A | 0.9 | 1.2 | -2.443198e+01 | -1.695919e+01 | 1.7e+01 | 2.5e+01 | 6.9e+01 | 1 | 3.3e+01 | 3.9e+01 | 36 |
| fr | 2000_10 | 1fv5:A | 2.3 | 2.8 | 1.915679e+01 | -1.414013e+01 | 5.6e+01 | 5.6e+01 | 8.6e+01 | 1 | 5.6e+01 | 5.6e+01 | 36 |
| fr | 2000_10 | 1fwq:A | 0.9 | 1.2 | -1.607368e+01 | -5.127412e+00 | 8.7e-01 | 3.5e+00 | 3.3e+01 | 1 | 1.7e+01 | 2.0e+01 | 115 |
| fr | 2000_10 | 1fxj:A | 2.5 | 2.6 | -9.008407e+00 | 5.869668e-01 | 0.0e+00 | 9.2e-01 | 2.0e+01 | 1 | 7.3e+00 | 8.6e+00 | 327 |
| fr | 2000_10 | 1gd2:G | 5.6 | 4.4 | -1.607368e+01 | 2.494237e+01 | 5.9e+01 | 5.9e+01 | 5.9e+01 | 1 | 5.8e+01 | 5.9e+01 | 64 |
| fr | 2000_10 | THIS_month:psum | 2.8 | 2.4 | 19.1 | 7.4 | 16.8 | 19.2 | 51.8 | 1 | 24.5 | 28.5 | 149.4 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |