| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2000_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2000_06 | THIS_month:psum | 2.3 | 2.0 | 2.3 | 10.4 | 13.4 | 34.7 | 1 | 16.7 | 18.7 | 210.7 | |
| fr | 2000_06 | 1dw3:A | 3.1 | 2.6 | -2.345434e+01 | 5.018526e+00 | 5.4e+00 | 1.3e+01 | 2.3e+01 | 1 | 1.9e+01 | 2.0e+01 | 112 |
| fr | 2000_06 | 1e0g:A | 1.7 | 2.3 | -1.796471e+01 | -1.269003e+01 | 3.3e+01 | 3.5e+01 | 7.5e+01 | 1 | 3.8e+01 | 4.2e+01 | 48 |
| fr | 2000_06 | 1ek9:A | 0.9 | 0 | -5.708716e+00 | 1.559081e+00 | 9.5e-01 | 1.2e+00 | 2.3e+01 | 1 | 0.0e+00 | 0.0e+00 | 423 |
| fr | 2000_06 | 1f1z:A | 3.5 | 3.3 | -1.269620e+01 | 4.295184e-01 | 2.3e+00 | 4.6e+00 | 1.8e+01 | 1 | 1.0e+01 | 1.3e+01 | 260 |
| fr | 2000_06 | THIS_month:psum | 2.3 | 2.0 | 2.3 | 10.4 | 13.4 | 34.7 | 1 | 16.7 | 18.7 | 210.7 | |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |