| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2002_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2002_08 | THIS_month:psum | 4.1 | 2.2 | 17.9 | 9.9 | 14.5 | 17.0 | 31.4 | 1 | 16.3 | 17.9 | 238.8 |
| fr | 2002_08 | 1gyd:B | 0.5 | 0 | -1.327826e+01 | -1.358816e+00 | 3.2e-01 | 6.3e-01 | 1.5e+01 | 1 | 0.0e+00 | 0.0e+00 | 315 |
| fr | 2002_08 | 1gyh:A | 0.5 | 0 | -1.327826e+01 | -1.355482e+00 | 3.1e-01 | 6.3e-01 | 1.4e+01 | 1 | 0.0e+00 | 0.0e+00 | 318 |
| fr | 2002_08 | 1gyh:D | 0.5 | 0 | -1.327826e+01 | -1.380034e+00 | 3.2e-01 | 6.3e-01 | 1.5e+01 | 1 | 0.0e+00 | 0.0e+00 | 316 |
| fr | 2002_08 | 1itu:A | 3.4 | 3.3 | 1.134369e-01 | -4.182302e-01 | 1.6e+00 | 3.3e+00 | 2.4e+01 | 1 | 8.7e+00 | 1.2e+01 | 369 |
| fr | 2002_08 | 1iu4:A | 1.4 | 0 | -7.347658e+00 | -1.313588e+00 | 6.0e-01 | 1.5e+00 | 2.5e+01 | 1 | 0.0e+00 | 0.0e+00 | 331 |
| fr | 2002_08 | 1iw4:A | 2.5 | 2.3 | -2.262222e+01 | -5.148956e+00 | 9.1e+00 | 2.2e+01 | 4.9e+01 | 1 | 3.1e+01 | 4.0e+01 | 55 |
| fr | 2002_08 | 1jv3:B | 2.2 | 2.0 | -6.707403e+00 | 9.491706e-01 | 6.2e-01 | 1.7e+00 | 1.9e+01 | 1 | 3.1e+00 | 3.9e+00 | 484 |
| fr | 2002_08 | 1l5p:A | 12.2 | 5.0 | 2.910638e+01 | 2.850790e+01 | 7.4e+01 | 8.2e+01 | 9.1e+01 | 1 | 8.2e+01 | 8.5e+01 | 93 |
| fr | 2002_08 | 1luz:B | 8.7 | 3.7 | -1.053098e+01 | 1.581122e+01 | 5.6e+01 | 6.4e+01 | 7.2e+01 | 1 | 6.1e+01 | 6.4e+01 | 80 |
| fr | 2002_08 | 1lvh:A | 14.4 | 0 | 2.652667e-01 | 1.360611e+01 | 2.5e+01 | 3.2e+01 | 6.2e+01 | 1 | 0.0e+00 | 0.0e+00 | 220 |
| fr | 2002_08 | 1lw7:A | 5.6 | 2.6 | -1.388182e+01 | 2.127974e+00 | 9.8e+00 | 1.0e+01 | 1.3e+01 | 1 | 1.2e+01 | 1.3e+01 | 338 |
| fr | 2002_08 | 1m44:A | 2.9 | 3.7 | -1.566146e+01 | 6.486780e+00 | 1.4e+01 | 1.4e+01 | 2.2e+01 | 1 | 1.4e+01 | 1.5e+01 | 177 |
| fr | 2002_08 | 1m4d:B | 2.9 | 3.7 | -1.565858e+01 | 6.159730e+00 | 1.4e+01 | 1.4e+01 | 2.2e+01 | 1 | 1.4e+01 | 1.5e+01 | 176 |
| fr | 2002_08 | 1m4g:B | 2.9 | 3.7 | -1.565883e+01 | 6.068256e+00 | 1.4e+01 | 1.4e+01 | 2.2e+01 | 1 | 1.4e+01 | 1.5e+01 | 176 |
| fr | 2002_08 | 1m4i:A | 2.9 | 3.7 | 4.216432e+01 | -2.228526e+00 | 1.3e+01 | 1.3e+01 | 2.2e+01 | 1 | 1.3e+01 | 1.4e+01 | 181 |
| fr | 2002_08 | 1m55:A | 2.2 | 2.8 | -1.970323e+01 | -1.581128e+00 | 0.0e+00 | 0.0e+00 | 1.6e+01 | 1 | 9.3e+00 | 9.8e+00 | 193 |
| fr | 2002_08 | THIS_month:psum | 4.1 | 2.2 | 17.9 | 9.9 | 14.5 | 17.0 | 31.4 | 1 | 16.3 | 17.9 | 238.8 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |