| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_02 | THIS_month:psum | 2 | 1.9 | 3.6 | 2.5 | 5.7 | 8.4 | 33.6 | 1 | 7.7 | 8.4 | 242.6 |
| fr | 2001_02 | 1dc1:A | 2.0 | 3.1 | -6.093997e+00 | 2.093997e+00 | 3.5e+00 | 5.8e+00 | 3.2e+01 | 1 | 1.0e+01 | 1.2e+01 | 310 |
| fr | 2001_02 | 1ehk:C | 0.5 | 0 | -1.018000e+02 | -1.850909e+01 | 1.5e+01 | 1.8e+01 | 1.8e+01 | 1 | 0.0e+00 | 0.0e+00 | 33 |
| fr | 2001_02 | 1eyr:A | 1.7 | 2.3 | -4.885988e+00 | -1.867977e+00 | 2.3e+00 | 3.6e+00 | 5.7e+01 | 1 | 1.4e+01 | 1.5e+01 | 220 |
| fr | 2001_02 | 1ezi:B | 2.4 | 0 | -5.928940e+00 | -2.326765e+00 | 2.4e+00 | 6.2e+00 | 5.0e+01 | 1 | 0.0e+00 | 0.0e+00 | 208 |
| fr | 2001_02 | 1fiu:A | 1.2 | 1.6 | -7.641390e+00 | -1.475122e+00 | 7.0e-01 | 1.4e+00 | 2.6e+01 | 1 | 8.7e+00 | 1.1e+01 | 286 |
| fr | 2001_02 | 1fkm:A | 1.9 | 2.8 | -1.090714e+01 | 3.259291e-01 | 6.5e-01 | 2.6e+00 | 1.8e+01 | 1 | 9.1e+00 | 9.1e+00 | 309 |
| fr | 2001_02 | 1fqj:C | 0.9 | 0 | -3.393333e+01 | -1.607368e+01 | 1.1e+01 | 2.1e+01 | 4.7e+01 | 1 | 0.0e+00 | 0.0e+00 | 38 |
| fr | 2001_02 | 1g8q:B | 2.9 | 2.8 | -2.545000e+01 | 6.685621e+00 | 2.0e+01 | 2.2e+01 | 2.8e+01 | 1 | 2.0e+01 | 2.0e+01 | 86 |
| fr | 2001_02 | 1g9r:A | 2.6 | 2.6 | -5.265463e+00 | -9.387269e-01 | 1.5e+00 | 3.3e+00 | 4.3e+01 | 1 | 8.9e+00 | 9.6e+00 | 271 |
| fr | 2001_02 | 1i1i:P | 3.9 | 4.1 | 3.649176e+00 | 1.136289e+00 | 3.0e-01 | 7.5e-01 | 1.7e+01 | 1 | 7.2e+00 | 8.1e+00 | 665 |
| fr | 2001_02 | THIS_month:psum | 2 | 1.9 | 3.6 | 2.5 | 5.7 | 8.4 | 33.6 | 1 | 7.7 | 8.4 | 242.6 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |