| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_10 | THIS_month:psum | 7.1 | 2.6 | 18.4 | 10.9 | 21.8 | 26.8 | 53.5 | 1 | 28.1 | 31.4 | 161.4 |
| fr | 2001_10 | 1h7d:A | 0.6 | 0 | -4.072000e+01 | -1.246531e+01 | 1.2e+01 | 2.0e+01 | 3.1e+01 | 1 | 0.0e+00 | 0.0e+00 | 49 |
| fr | 2001_10 | 1imu:A | 2.7 | 2.3 | -5.022082e+00 | -1.606112e+00 | 1.9e+00 | 4.7e+00 | 6.2e+01 | 1 | 2.6e+01 | 3.1e+01 | 107 |
| fr | 2001_10 | 1j8i:A | 9.0 | 4.6 | 2.875904e+01 | 1.744350e+01 | 5.5e+01 | 5.9e+01 | 6.3e+01 | 1 | 5.5e+01 | 5.8e+01 | 93 |
| fr | 2001_10 | 1jcj:B | 9.8 | 2.3 | -2.648214e+00 | 1.029310e+01 | 8.0e+00 | 1.5e+01 | 4.6e+01 | 1 | 2.4e+01 | 2.5e+01 | 251 |
| fr | 2001_10 | 1jf8:A | 1.2 | 2.3 | -9.669009e+00 | 2.082900e+00 | 7.7e-01 | 3.1e+00 | 4.8e+01 | 1 | 1.2e+01 | 2.3e+01 | 130 |
| fr | 2001_10 | 1jid:A | 1.7 | 1.6 | -8.678628e+00 | -2.694846e+00 | 2.6e+00 | 5.3e+00 | 6.1e+01 | 1 | 1.6e+01 | 1.7e+01 | 114 |
| fr | 2001_10 | 1jjf:A | 12.0 | 2.6 | -3.763999e+00 | 8.182222e+00 | 1.5e+01 | 2.5e+01 | 5.0e+01 | 1 | 3.4e+01 | 4.0e+01 | 255 |
| fr | 2001_10 | 1jjs:A | 1.9 | 0 | -3.214737e+01 | -1.454286e+01 | 3.1e+01 | 3.8e+01 | 4.5e+01 | 1 | 0.0e+00 | 0.0e+00 | 42 |
| fr | 2001_10 | 1jkg:A | 14.6 | 4.7 | 4.738056e+00 | 2.637577e+01 | 6.5e+01 | 6.9e+01 | 7.6e+01 | 1 | 7.3e+01 | 7.4e+01 | 139 |
| fr | 2001_10 | 1jqr:A | 18.9 | 5.0 | 1.910342e+01 | 1.726345e+01 | 5.7e+01 | 6.6e+01 | 8.4e+01 | 1 | 7.1e+01 | 7.5e+01 | 174 |
| fr | 2001_10 | 1js3:A | 10.9 | 3.7 | 2.107604e+01 | 4.455449e+00 | 1.1e+01 | 1.2e+01 | 1.8e+01 | 1 | 1.4e+01 | 1.4e+01 | 464 |
| fr | 2001_10 | 1jya:B | 2.0 | 2.3 | -8.530180e+00 | 1.156101e+00 | 3.4e+00 | 5.0e+00 | 5.9e+01 | 1 | 1.3e+01 | 2.0e+01 | 119 |
| fr | 2001_10 | THIS_month:psum | 7.1 | 2.6 | 18.4 | 10.9 | 21.8 | 26.8 | 53.5 | 1 | 28.1 | 31.4 | 161.4 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |