| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2002_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2002_09 | THIS_month:psum | 2.9 | 2.4 | 8.3 | 5.3 | 8.3 | 12.9 | 46.0 | 1 | 20.5 | 24.6 | 203.8 |
| fr | 2002_09 | 1gxt:A | 6.7 | 4.4 | -8.264483e+00 | 1.363123e+01 | 4.1e+01 | 4.8e+01 | 6.9e+01 | 1 | 4.4e+01 | 4.8e+01 | 88 |
| fr | 2002_09 | 1iya:A | 9.8 | 4.4 | 1.159812e+01 | 8.319035e+00 | 1.8e+01 | 2.9e+01 | 5.2e+01 | 1 | 4.0e+01 | 4.3e+01 | 187 |
| fr | 2002_09 | 1kn0:A | 2.8 | 2.3 | -8.652384e+00 | -3.055400e-01 | 1.1e+00 | 2.7e+00 | 3.8e+01 | 1 | 1.1e+01 | 1.6e+01 | 184 |
| fr | 2002_09 | 1ko6:C | 1.8 | 0.7 | -1.357333e+01 | -3.953691e+00 | 1.4e+00 | 3.4e+00 | 3.0e+01 | 1 | 8.8e+00 | 1.2e+01 | 148 |
| fr | 2002_09 | 1koy:A | 1.5 | 2.6 | -1.327826e+01 | -7.437970e-01 | 9.7e+00 | 1.8e+01 | 7.4e+01 | 1 | 5.2e+01 | 6.0e+01 | 62 |
| fr | 2002_09 | 1lrz:A | 2.0 | 3.1 | 1.289510e+01 | 2.388305e+00 | 5.0e-01 | 1.8e+00 | 2.3e+01 | 1 | 1.0e+01 | 1.2e+01 | 400 |
| fr | 2002_09 | 1lt8:A | 2.2 | 2.8 | -3.551950e+00 | 2.005540e+00 | 0.0e+00 | 2.9e-01 | 3.3e+01 | 1 | 8.3e+00 | 1.0e+01 | 348 |
| fr | 2002_09 | 1lv3:A | 1.6 | 2.0 | -1.174603e+01 | -9.014631e+00 | 7.7e+00 | 1.1e+01 | 8.0e+01 | 1 | 2.6e+01 | 3.7e+01 | 65 |
| fr | 2002_09 | 1m2v:A | 2.1 | 2.6 | 5.964298e-01 | 2.829581e-01 | 7.1e-01 | 1.1e+00 | 1.4e+01 | 1 | 4.3e+00 | 5.2e+00 | 705 |
| fr | 2002_09 | 1m8o:B | 1.4 | 2.0 | -2.908526e+01 | -1.299574e+01 | 1.1e+01 | 2.1e+01 | 4.5e+01 | 1 | 2.8e+01 | 3.6e+01 | 47 |
| fr | 2002_09 | 1miu:B | 0.5 | 0 | -2.349231e+01 | -1.454286e+01 | 4.8e+00 | 1.2e+01 | 6.2e+01 | 1 | 0.0e+00 | 0.0e+00 | 42 |
| fr | 2002_09 | 1mm5:A | 2.5 | 2.3 | -1.056911e+01 | -2.386833e-01 | 4.7e+00 | 7.6e+00 | 3.3e+01 | 1 | 1.4e+01 | 1.6e+01 | 170 |
| fr | 2002_09 | THIS_month:psum | 2.9 | 2.4 | 8.3 | 5.3 | 8.3 | 12.9 | 46.0 | 1 | 20.5 | 24.6 | 203.8 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |