| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_12 | THIS_month:psum | 4.5 | 2.7 | 17.3 | 4.7 | 11.3 | 15.3 | 40.8 | 1 | 19.6 | 21.6 | 219 |
| fr | 2001_12 | 1hn3:A | 1.3 | 2.0 | -1.696667e+01 | -1.509785e+01 | 3.0e+01 | 3.5e+01 | 9.0e+01 | 1 | 3.8e+01 | 4.0e+01 | 40 |
| fr | 2001_12 | 1hnn:B | 2.0 | 2.6 | -7.932468e+00 | 4.228056e-01 | 3.4e+00 | 6.1e+00 | 2.9e+01 | 1 | 7.3e+00 | 8.8e+00 | 262 |
| fr | 2001_12 | 1hqz:1 | 7.1 | 3.7 | -8.310178e+00 | 8.343989e+00 | 2.9e+01 | 3.2e+01 | 4.2e+01 | 1 | 3.2e+01 | 3.2e+01 | 139 |
| fr | 2001_12 | 1hqz:5 | 6.9 | 3.7 | -8.848695e+00 | 8.302714e+00 | 2.9e+01 | 3.2e+01 | 4.3e+01 | 1 | 3.2e+01 | 3.3e+01 | 136 |
| fr | 2001_12 | 1hqz:8 | 7.1 | 3.7 | -1.035239e+01 | 8.371320e+00 | 3.0e+01 | 3.3e+01 | 4.5e+01 | 1 | 3.3e+01 | 3.4e+01 | 132 |
| fr | 2001_12 | 1j84:A | 2.0 | 2.0 | -1.272500e+01 | -3.060796e+00 | 3.4e+00 | 6.7e+00 | 2.7e+01 | 1 | 1.1e+01 | 1.5e+01 | 179 |
| fr | 2001_12 | 1jbj:A | 9.2 | 2.6 | 1.731428e+01 | 7.469971e+00 | 2.4e+01 | 3.1e+01 | 3.4e+01 | 1 | 1.9e+01 | 2.2e+01 | 186 |
| fr | 2001_12 | 1jmv:C | 1.6 | 2.6 | -6.478474e+00 | 4.761658e-01 | 3.0e+00 | 5.3e+00 | 7.0e+01 | 1 | 1.8e+01 | 2.0e+01 | 133 |
| fr | 2001_12 | 1jra:A | 2.2 | 3.3 | -1.152453e+01 | 7.870695e+00 | 9.4e-01 | 5.7e+00 | 5.0e+01 | 1 | 2.7e+01 | 2.8e+01 | 106 |
| fr | 2001_12 | 1jra:D | 3.4 | 2.8 | -2.106607e+00 | 5.298023e+00 | 4.9e+00 | 1.7e+01 | 7.1e+01 | 1 | 2.6e+01 | 2.6e+01 | 103 |
| fr | 2001_12 | 1ju3:A | 2.3 | 2.3 | -5.495576e+00 | 4.216052e-01 | 8.8e-01 | 1.9e+00 | 1.9e+01 | 1 | 8.9e+00 | 1.2e+01 | 570 |
| fr | 2001_12 | 1k8k:E | 2.1 | 2.8 | -9.851495e+00 | -2.493395e+00 | 0.0e+00 | 1.7e+00 | 3.6e+01 | 1 | 1.6e+01 | 2.0e+01 | 174 |
| fr | 2001_12 | 1k92:A | 8.4 | 3.3 | -4.037750e-01 | 2.628546e+00 | 5.4e+00 | 1.1e+01 | 2.1e+01 | 1 | 1.0e+01 | 1.2e+01 | 444 |
| fr | 2001_12 | 1k97:A | 9.9 | 3.1 | -1.307654e+00 | 2.216656e+00 | 5.8e+00 | 1.1e+01 | 2.3e+01 | 1 | 1.1e+01 | 1.3e+01 | 432 |
| fr | 2001_12 | 1kc6:A | 2.3 | 1.2 | -1.970323e+01 | -1.467085e+00 | 4.0e-01 | 1.2e+00 | 1.2e+01 | 1 | 5.2e+00 | 8.4e+00 | 249 |
| fr | 2001_12 | THIS_month:psum | 4.5 | 2.7 | 17.3 | 4.7 | 11.3 | 15.3 | 40.8 | 1 | 19.6 | 21.6 | 219 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |