| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_08 | THIS_month:psum | 1.8 | 2.3 | 8.0 | 2.0 | 3.8 | 5.6 | 34.6 | 1 | 11.1 | 15.1 | 270.7 |
| fr | 2001_08 | 1f35:A | 1.7 | 0 | -9.254379e+00 | -3.135861e+00 | 6.4e-01 | 1.3e+00 | 4.2e+01 | 1 | 0.0e+00 | 0.0e+00 | 157 |
| fr | 2001_08 | 1h7y:A | 2.5 | 2.8 | 1.494645e+01 | 1.713948e+00 | 9.5e+00 | 1.2e+01 | 4.3e+01 | 1 | 1.7e+01 | 2.0e+01 | 168 |
| fr | 2001_08 | 1hi9:A | 1.5 | 2.8 | 1.157198e+00 | -4.250074e-01 | 1.8e+00 | 2.6e+00 | 2.4e+01 | 1 | 9.5e+00 | 1.1e+01 | 274 |
| fr | 2001_08 | 1i19:B | 2.7 | 2.0 | -1.299568e+01 | 8.124207e-01 | 0.0e+00 | 1.9e-01 | 8.7e+00 | 1 | 3.3e+00 | 5.2e+00 | 538 |
| fr | 2001_08 | 1ihr:B | 1.0 | 2.3 | -1.745143e+01 | -7.607313e+00 | 1.1e+01 | 1.5e+01 | 4.7e+01 | 1 | 1.8e+01 | 2.2e+01 | 74 |
| fr | 2001_08 | 1ipg:A | 1.7 | 2.0 | -1.357333e+01 | -4.811743e+00 | 7.1e+00 | 1.2e+01 | 5.3e+01 | 1 | 2.4e+01 | 3.4e+01 | 85 |
| fr | 2001_08 | 1jb0:A | 2.1 | 2.8 | -7.097667e+00 | 1.108253e+00 | 3.0e+00 | 4.2e+00 | 1.2e+01 | 1 | 4.1e+00 | 4.9e+00 | 740 |
| fr | 2001_08 | 1jb0:D | 1.6 | 3.1 | -3.445319e+00 | -2.707946e+00 | 2.2e+00 | 3.6e+00 | 6.0e+01 | 1 | 1.4e+01 | 2.0e+01 | 138 |
| fr | 2001_08 | 1jc7:A | 1.3 | 3.1 | -7.830624e+00 | 4.408893e+00 | 2.3e+00 | 6.2e+00 | 6.0e+01 | 1 | 1.9e+01 | 3.3e+01 | 129 |
| fr | 2001_08 | 1je5:B | 1.7 | 2.0 | -1.650811e+01 | -2.951399e+00 | 4.4e+00 | 4.9e+00 | 2.0e+01 | 1 | 7.7e+00 | 1.0e+01 | 182 |
| fr | 2001_08 | 1jey:A | 2.5 | 2.8 | -1.021409e+01 | -4.098526e-01 | 0.0e+00 | 4.1e-01 | 1.1e+01 | 1 | 5.5e+00 | 6.5e+00 | 493 |
| fr | 2001_08 | THIS_month:psum | 1.8 | 2.3 | 8.0 | 2.0 | 3.8 | 5.6 | 34.6 | 1 | 11.1 | 15.1 | 270.7 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |