| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_09 | THIS_month:psum | 5.2 | 2.5 | 15.5 | 21.8 | 25.0 | 53.2 | 1 | 28.3 | 31.1 | 210.7 | |
| fr | 2001_09 | 1fxz:A | 21.3 | 4.9 | -3.830589e+00 | 1.187820e+01 | 3.5e+01 | 4.0e+01 | 4.3e+01 | 1 | 3.9e+01 | 4.0e+01 | 371 |
| fr | 2001_09 | 1gd8:A | 1.4 | 2.3 | -7.270612e+00 | 3.492312e+00 | 2.9e+00 | 8.6e+00 | 8.0e+01 | 1 | 1.2e+01 | 1.9e+01 | 105 |
| fr | 2001_09 | 1h6k:B | 1.8 | 0 | -1.448173e+01 | -7.499528e-01 | 4.1e-01 | 1.4e+00 | 5.8e+00 | 1 | 0.0e+00 | 0.0e+00 | 729 |
| fr | 2001_09 | 1h6k:Y | 10.6 | 4.2 | -7.412525e+00 | 3.803196e+01 | 8.8e+01 | 8.8e+01 | 9.3e+01 | 1 | 8.8e+01 | 8.8e+01 | 76 |
| fr | 2001_09 | 1h6p:B | 1.8 | 3.1 | -8.144000e+00 | 4.044535e+00 | 2.7e+00 | 3.7e+00 | 4.0e+01 | 1 | 1.6e+01 | 1.9e+01 | 188 |
| fr | 2001_09 | 1i18:A | 4.0 | 2.6 | -7.290820e+00 | -3.481717e+00 | 1.5e+01 | 2.5e+01 | 4.2e+01 | 1 | 3.1e+01 | 3.2e+01 | 97 |
| fr | 2001_09 | 1j75:A | 8.3 | 4.4 | -1.090714e+01 | 3.561881e+01 | 8.8e+01 | 8.9e+01 | 9.8e+01 | 1 | 8.9e+01 | 9.1e+01 | 57 |
| fr | 2001_09 | 1j9j:A | 4.1 | 2.6 | -7.659396e+00 | 2.108476e-01 | 2.0e+00 | 3.6e+00 | 3.2e+01 | 1 | 1.4e+01 | 2.2e+01 | 247 |
| fr | 2001_09 | 1jnx:X | 1.0 | 1.6 | -1.152453e+01 | -2.488662e+00 | 9.7e-01 | 3.9e+00 | 2.6e+01 | 1 | 6.3e+00 | 7.7e+00 | 207 |
| fr | 2001_09 | 1jpy:A | 2.7 | 2.3 | -6.474836e+00 | -8.818007e-03 | 1.7e+00 | 5.8e+00 | 7.8e+01 | 1 | 1.7e+01 | 2.4e+01 | 121 |
| fr | 2001_09 | 1jpy:Y | 1.0 | 0 | -1.053103e+01 | -4.548946e+00 | 3.3e+00 | 6.7e+00 | 4.8e+01 | 1 | 0.0e+00 | 0.0e+00 | 120 |
| fr | 2001_09 | THIS_month:psum | 5.2 | 2.5 | 15.5 | 21.8 | 25.0 | 53.2 | 1 | 28.3 | 31.1 | 210.7 | |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |