| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2002_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2002_06 | THIS_month:psum | 5.4 | 2.5 | 14.7 | 6.8 | 11.7 | 16.6 | 44.3 | 1 | 19.9 | 22.0 | 189.5 |
| fr | 2002_06 | 1gty:A | 0.6 | 0.0 | -1.221482e+01 | -7.544815e+00 | 0.0e+00 | 1.2e+00 | 6.2e+01 | 1 | 2.0e+01 | 2.5e+01 | 80 |
| fr | 2002_06 | 1iuf:A | 5.7 | 2.8 | -1.757267e+00 | 9.557013e-02 | 6.9e+00 | 1.6e+01 | 6.1e+01 | 1 | 1.7e+01 | 1.7e+01 | 144 |
| fr | 2002_06 | 1kc3:A | 16.8 | 3.3 | 2.160828e+01 | 1.016946e+01 | 3.0e+01 | 3.6e+01 | 4.5e+01 | 1 | 3.6e+01 | 3.8e+01 | 297 |
| fr | 2002_06 | 1kmd:A | 2.2 | 2.0 | -1.152453e+01 | -4.463469e+00 | 2.6e+00 | 7.7e+00 | 4.5e+01 | 1 | 1.5e+01 | 1.7e+01 | 117 |
| fr | 2002_06 | 1l1o:C | 1.9 | 2.3 | -8.852174e+00 | -1.176913e+00 | 2.9e+00 | 8.7e+00 | 4.0e+01 | 1 | 1.1e+01 | 1.4e+01 | 173 |
| fr | 2002_06 | 1l2q:A | 2.1 | 2.8 | -1.607366e+01 | -3.344008e-01 | 1.1e+00 | 1.8e+00 | 8.3e+00 | 1 | 4.4e+00 | 4.8e+00 | 457 |
| fr | 2002_06 | 1l3a:B | 2.4 | 2.8 | -1.221600e+01 | -2.602067e+00 | 4.1e+00 | 6.5e+00 | 2.9e+01 | 1 | 1.4e+01 | 1.9e+01 | 170 |
| fr | 2002_06 | 1l8r:A | 2.1 | 0 | -1.110545e+01 | 3.332444e+00 | 2.0e+00 | 9.0e+00 | 5.5e+01 | 1 | 0.0e+00 | 0.0e+00 | 100 |
| fr | 2002_06 | 1l8z:A | 8.7 | 3.9 | 1.358463e+01 | 8.353168e+00 | 4.0e+01 | 4.6e+01 | 8.1e+01 | 1 | 4.0e+01 | 4.0e+01 | 84 |
| fr | 2002_06 | 1l9v:A | 1.3 | 2.0 | -8.079642e+00 | -1.623426e+00 | 9.6e-01 | 2.9e+00 | 1.7e+01 | 1 | 5.1e+00 | 7.3e+00 | 313 |
| fr | 2002_06 | 1ln2:A | 8.6 | 4.1 | -7.942628e+00 | 4.455952e+00 | 1.6e+01 | 2.4e+01 | 3.7e+01 | 1 | 2.8e+01 | 3.1e+01 | 197 |
| fr | 2002_06 | 1lqv:A | 15.5 | 5.7 | 9.009797e+00 | 1.482103e+01 | 4.1e+01 | 5.1e+01 | 6.3e+01 | 1 | 5.8e+01 | 6.0e+01 | 172 |
| fr | 2002_06 | 1lr5:A | 2.7 | 1.6 | -1.152453e+01 | -2.919805e+00 | 5.0e+00 | 6.2e+00 | 3.3e+01 | 1 | 1.1e+01 | 1.4e+01 | 160 |
| fr | 2002_06 | THIS_month:psum | 5.4 | 2.5 | 14.7 | 6.8 | 11.7 | 16.6 | 44.3 | 1 | 19.9 | 22.0 | 189.5 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |