EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	448	93	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	366	78	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
PHD	373	78	method/phd.html
PHDpsi	370	78	method/phdpsi.html
PROF_king	375	86	method/prof_king.html
PROFsec	373	78	method/profsec.html
Prospect	286	74	method/prospect.html
PSIpred	374	86	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	87	23	method/sable.html
SABLE2	30	6	method/sable2.html
SAM-T99sec	329	86	method/samt99_sec.html
SCRATCH (SSpro3)	168	42	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	19	6	method/sspro4.html
yaspin	40	10	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 70 proteins and 5 methods (HTML - ASCII)
- set 6: 71 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.34	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	0.10	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.34	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	70	dssp	1	PSIpred	77.5	+/-1.4	76.3	+/-2.1	0.37	+/-0.02	87.1	+/-4.0
				SAM-T99sec	77.2	+/-1.3	74.7	+/-1.7	0.38	+/-0.02	87.1	+/-4.0
common 5	70	dssp	2	PROFsec	75.6	+/-1.6	75.3	+/-2.0	0.38	+/-0.02	82.9	+/-4.5
common 5	70	dssp	3	PHD	72.7	+/-1.5	69.7	+/-2.1	0.34	+/-0.02	84.3	+/-4.4
				PHDpsi	73.0	+/-1.5	69.9	+/-2.2	0.34	+/-0.02	84.3	+/-4.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	71	dssp	1	PSIpred	77.5	+/-1.4	76.6	+/-2.0	0.37	+/-0.02	87.3	+/-4.0
common 6	71	dssp	2	PROFsec	75.7	+/-1.5	75.4	+/-1.9	0.37	+/-0.02	83.1	+/-4.5
common 6	71	dssp	3	PHD	72.8	+/-1.5	69.9	+/-2.1	0.34	+/-0.02	83.1	+/-4.5
				PHDpsi	73.2	+/-1.5	70.2	+/-2.1	0.34	+/-0.02	83.1	+/-4.5