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EVA summary for category sec (1)

Contents

About secondary structure prediction methods evaluated

Method NprotNweekDetailed results for method
ALL 448 93 method/index.html
APSSP   00method/apssp.html
APSSP2   36678method/apssp2.html
JPred   16729method/jpred.html
JUFO   13338method/jufo.html
PHD   37378method/phd.html
PHDpsi   37078method/phdpsi.html
PROF_king   37586method/prof_king.html
PROFsec   37378method/profsec.html
Prospect   28674method/prospect.html
PSIpred   37486method/psipred.html
PSSP   11method/pssp.html
SABLE   8723method/sable.html
SABLE2   306method/sable2.html
SAM-T99sec   32986method/samt99_sec.html
SCRATCH (SSpro3)   16842method/scratch.html
SSpro1   11method/sspro1.html
SSpro2   25748method/sspro2.html
SSpro4   196method/sspro4.html
yaspin   4010method/yaspin.html

 


Comparison of secondary structure prediction methods (detail level 1)

Averages compiled over different subsets

 


Set 1

Sorted alphabetically for identical ranks!     MORE SCORES    
subset nprot sots rank method Q3 ERRsigQ3 sov ERRsigsov info ERRsiginfo class ERRsigclass
common 11dssp1JPred84.5+/-10.079.1+/-10.00.38+/-10.00100.0+/-10.0
PHD75.5+/-10.074.0+/-10.00.34+/-10.00100.0+/-10.0
PHDpsi82.7+/-10.084.1+/-10.00.40+/-10.000.0+/-10.0
PROF_king80.9+/-10.087.0+/-10.00.40+/-10.000.0+/-10.0
PROFsec80.9+/-10.088.3+/-10.00.40+/-10.000.0+/-10.0
Prospect70.9+/-10.063.7+/-10.00.22+/-10.000.0+/-10.0
PSIpred70.9+/-10.063.7+/-10.00.22+/-10.000.0+/-10.0
SAM-T99sec78.2+/-10.074.7+/-10.00.25+/-10.000.0+/-10.0
SSpro279.1+/-10.086.8+/-10.00.34+/-10.000.0+/-10.0
common 11dssp2APSSP256.4+/-10.045.9+/-10.00.10+/-10.00100.0+/-10.0

 


Set 2

Sorted alphabetically for identical ranks!     MORE SCORES    
subset nprot sots rank method Q3 ERRsigQ3 sov ERRsigsov info ERRsiginfo class ERRsigclass
common 21dssp1JPred84.5+/-10.079.1+/-10.00.38+/-10.00100.0+/-10.0
PHD75.5+/-10.074.0+/-10.00.34+/-10.00100.0+/-10.0
PHDpsi82.7+/-10.084.1+/-10.00.40+/-10.000.0+/-10.0
PROF_king80.9+/-10.087.0+/-10.00.40+/-10.000.0+/-10.0
PROFsec80.9+/-10.088.3+/-10.00.40+/-10.000.0+/-10.0
PSIpred70.9+/-10.063.7+/-10.00.22+/-10.000.0+/-10.0
SAM-T99sec78.2+/-10.074.7+/-10.00.25+/-10.000.0+/-10.0
SSpro279.1+/-10.086.8+/-10.00.34+/-10.000.0+/-10.0

 


Set 3

Sorted alphabetically for identical ranks!     MORE SCORES    
subset nprot sots rank method Q3 ERRsigQ3 sov ERRsigsov info ERRsiginfo class ERRsigclass
common 31dssp1JPred84.5+/-10.079.1+/-10.00.38+/-10.00100.0+/-10.0
PHD75.5+/-10.074.0+/-10.00.34+/-10.00100.0+/-10.0
PHDpsi82.7+/-10.084.1+/-10.00.40+/-10.000.0+/-10.0
PROF_king80.9+/-10.087.0+/-10.00.40+/-10.000.0+/-10.0
PROFsec80.9+/-10.088.3+/-10.00.40+/-10.000.0+/-10.0
PSIpred70.9+/-10.063.7+/-10.00.22+/-10.000.0+/-10.0
SAM-T99sec78.2+/-10.074.7+/-10.00.25+/-10.000.0+/-10.0

 


Set 4

Sorted alphabetically for identical ranks!     MORE SCORES    
subset nprot sots rank method Q3 ERRsigQ3 sov ERRsigsov info ERRsiginfo class ERRsigclass
common 41dssp1JPred84.5+/-10.079.1+/-10.00.38+/-10.00100.0+/-10.0
PHD75.5+/-10.074.0+/-10.00.34+/-10.00100.0+/-10.0
PHDpsi82.7+/-10.084.1+/-10.00.40+/-10.000.0+/-10.0
PROFsec80.9+/-10.088.3+/-10.00.40+/-10.000.0+/-10.0
PSIpred70.9+/-10.063.7+/-10.00.22+/-10.000.0+/-10.0
SAM-T99sec78.2+/-10.074.7+/-10.00.25+/-10.000.0+/-10.0

 


Set 5

Sorted alphabetically for identical ranks!     MORE SCORES    
subset nprot sots rank method Q3 ERRsigQ3 sov ERRsigsov info ERRsiginfo class ERRsigclass
common 570dssp1PSIpred77.5+/-1.476.3+/-2.10.37+/-0.0287.1+/-4.0
SAM-T99sec77.2+/-1.374.7+/-1.70.38+/-0.0287.1+/-4.0
common 570dssp2PROFsec75.6+/-1.675.3+/-2.00.38+/-0.0282.9+/-4.5
common 570dssp3PHD72.7+/-1.569.7+/-2.10.34+/-0.0284.3+/-4.4
PHDpsi73.0+/-1.569.9+/-2.20.34+/-0.0284.3+/-4.4

 


Set 6

Sorted alphabetically for identical ranks!     MORE SCORES    
subset nprot sots rank method Q3 ERRsigQ3 sov ERRsigsov info ERRsiginfo class ERRsigclass
common 671dssp1PSIpred77.5+/-1.476.6+/-2.00.37+/-0.0287.3+/-4.0
common 671dssp2PROFsec75.7+/-1.575.4+/-1.90.37+/-0.0283.1+/-4.5
common 671dssp3PHD72.8+/-1.569.9+/-2.10.34+/-0.0283.1+/-4.5
PHDpsi73.2+/-1.570.2+/-2.10.34+/-0.0283.1+/-4.5

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