EVA summary for category sec (2)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	438	90	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	356	75	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	132	37	method/jufo.html
PHD	367	76	method/phd.html
PHDpsi	364	76	method/phdpsi.html
PROF_king	365	83	method/prof_king.html
PROFsec	367	76	method/profsec.html
Prospect	280	72	method/prospect.html
PSIpred	364	83	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	77	20	method/sable.html
SABLE2	20	3	method/sable2.html
SAM-T99sec	319	83	method/samt99_sec.html
SCRATCH (SSpro3)	156	38	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
	9	3	method/sspro4.html
	11	4	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 64 proteins and 5 methods (HTML - ASCII)
- set 6: 65 proteins and 4 methods (HTML - ASCII)
Detail level 2 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	4.5	+/-10.0	0.10	+/-10.00	1.00	+/-10.00	0.40	+/-10.00	0.22	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	64	dssp	1	PSIpred	77.3	+/-1.4	75.5	+/-2.1	2.7	+/-0.7	0.37	+/-0.02	0.68	+/-0.03	0.70	+/-0.04	0.56	+/-0.03	85.9	+/-4.4
				SAM-T99sec	77.1	+/-1.3	74.1	+/-1.8	4.0	+/-0.8	0.38	+/-0.02	0.67	+/-0.03	0.71	+/-0.04	0.58	+/-0.03	87.5	+/-4.2
common 5	64	dssp	2	PROFsec	75.4	+/-1.7	74.8	+/-2.1	4.8	+/-1.0	0.37	+/-0.02	0.66	+/-0.03	0.70	+/-0.04	0.56	+/-0.02	82.8	+/-4.8
common 5	64	dssp	3	PHD	72.7	+/-1.6	68.9	+/-2.2	6.0	+/-1.3	0.34	+/-0.02	0.64	+/-0.04	0.67	+/-0.04	0.52	+/-0.03	84.4	+/-4.6
				PHDpsi	73.1	+/-1.6	69.2	+/-2.2	5.8	+/-1.3	0.34	+/-0.02	0.64	+/-0.04	0.68	+/-0.04	0.53	+/-0.03	84.4	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	65	dssp	1	PSIpred	77.3	+/-1.4	75.7	+/-2.1	2.7	+/-0.7	0.36	+/-0.02	0.69	+/-0.03	0.70	+/-0.04	0.56	+/-0.03	86.2	+/-4.3
common 6	65	dssp	2	PROFsec	75.4	+/-1.6	74.9	+/-2.0	4.7	+/-0.9	0.37	+/-0.02	0.67	+/-0.03	0.70	+/-0.04	0.57	+/-0.02	83.1	+/-4.7
common 6	65	dssp	3	PHD	72.9	+/-1.5	69.2	+/-2.2	5.9	+/-1.3	0.34	+/-0.02	0.65	+/-0.04	0.67	+/-0.04	0.53	+/-0.03	83.1	+/-4.7
				PHDpsi	73.3	+/-1.6	69.5	+/-2.2	5.7	+/-1.3	0.34	+/-0.02	0.65	+/-0.03	0.68	+/-0.04	0.53	+/-0.03	83.1	+/-4.7