EVA summary for category sec (2)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	409	84	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	327	69	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	105	31	method/jufo.html
PHD	339	70	method/phd.html
PHDpsi	336	70	method/phdpsi.html
PROF_king	337	77	method/prof_king.html
PROFsec	339	70	method/profsec.html
Prospect	255	67	method/prospect.html
PSIpred	335	77	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	48	14	method/sable.html
SAM-T99sec	290	77	method/samt99_sec.html
SCRATCH (SSpro3)	130	33	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 38 proteins and 5 methods (HTML - ASCII)
- set 6: 39 proteins and 4 methods (HTML - ASCII)
Detail level 2 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	4.5	+/-10.0	0.10	+/-10.00	1.00	+/-10.00	0.40	+/-10.00	0.22	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	38	dssp	1	SAM-T99sec	78.2	+/-1.4	75.7	+/-2.0	2.6	+/-1.0	0.39	+/-0.02	0.71	+/-0.04	0.64	+/-0.05	0.58	+/-0.03	84.2	+/-6.0
common 5	38	dssp	2	PHD	73.0	+/-1.5	70.0	+/-2.5	4.6	+/-1.2	0.32	+/-0.03	0.66	+/-0.05	0.59	+/-0.05	0.49	+/-0.03	84.2	+/-6.0
				PHDpsi	73.6	+/-1.5	70.4	+/-2.5	4.3	+/-1.2	0.32	+/-0.03	0.66	+/-0.04	0.60	+/-0.05	0.50	+/-0.03	84.2	+/-6.0
				PROFsec	75.3	+/-1.8	74.2	+/-2.6	3.7	+/-1.0	0.35	+/-0.03	0.67	+/-0.04	0.64	+/-0.05	0.53	+/-0.03	84.2	+/-6.0
				PSIpred	75.7	+/-1.7	71.9	+/-2.6	3.2	+/-1.1	0.33	+/-0.03	0.69	+/-0.04	0.64	+/-0.05	0.52	+/-0.03	84.2	+/-6.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	39	dssp	1	PHD	73.2	+/-1.5	70.5	+/-2.5	4.5	+/-1.2	0.32	+/-0.03	0.67	+/-0.05	0.59	+/-0.05	0.49	+/-0.03	82.1	+/-6.2
				PHDpsi	73.8	+/-1.5	70.9	+/-2.5	4.2	+/-1.2	0.32	+/-0.03	0.67	+/-0.04	0.60	+/-0.05	0.50	+/-0.03	82.1	+/-6.2
				PROFsec	75.4	+/-1.8	74.4	+/-2.5	3.6	+/-1.0	0.34	+/-0.03	0.68	+/-0.04	0.64	+/-0.05	0.53	+/-0.03	84.6	+/-5.9
				PSIpred	75.8	+/-1.7	72.4	+/-2.6	3.1	+/-1.1	0.33	+/-0.03	0.70	+/-0.04	0.64	+/-0.05	0.52	+/-0.03	84.6	+/-5.9