Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 610 | 247 | method/index.html | ||
3D-PSSM | 417 | 194 | method/3dpssm.html | ||
BLAST | 591 | 242 | method/blast.html | ||
FUGUE | 496 | 211 | method/fugue.html | ||
Libellula | 99 | 57 | method/libellula.html | ||
Prospect | 124 | 60 | method/prospect.html | ||
PSI-BLAST | 595 | 246 | method/psiblast.html | ||
SAMt99 | 199 | 118 | method/samt99.html | ||
ssearch | 589 | 243 | method/ssearch.html | ||
Superfamily | 245 | 106 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 26 | 1 | 3D-PSSM | 17 | 8.5 (+/-1.1) | 12 | 3.4 (+/-0.2) | 12 | 2.6 (+/-1.8) | 18 | 6.4 (+/-1.5) | 21.6 (+/-4.1) | 30.6 (+/-5.0) | 40.7 (+/-4.3) | 46.4 (+/-4.5) | 83.7 (+/-2.6) | ||||||||||||||||||||||
BLAST | 0 | 1.8 (+/-0.2) | 0 | 2.2 (+/-0.1) | 1 | -10.2 (+/-1.5) | 2 | -1.4 (+/-0.8) | 4.6 (+/-0.9) | 7.8 (+/-1.3) | 14.7 (+/-1.6) | 19.4 (+/-2.2) | 39.3 (+/-4.1) | |||||||||||||||||||||||||
FUGUE | 18 | 8.7 (+/-1.2) | 13 | 3.7 (+/-0.3) | 14 | 3.5 (+/-1.8) | 18 | 6.3 (+/-1.5) | 19.4 (+/-4.0) | 28.2 (+/-5.1) | 41.0 (+/-4.3) | 46.5 (+/-4.2) | 92.3 (+/-2.1) | |||||||||||||||||||||||||
Libellula | 16 | 8.5 (+/-1.2) | 8 | 3.0 (+/-0.3) | 12 | 4.3 (+/-2.3) | 18 | 6.3 (+/-1.5) | 20.5 (+/-4.0) | 29.7 (+/-5.2) | 37.2 (+/-4.6) | 43.0 (+/-4.7) | 92.8 (+/-2.7) | |||||||||||||||||||||||||
Prospect | 13 | 7.4 (+/-1.2) | 11 | 3.5 (+/-0.2) | 12 | 3.8 (+/-2.1) | 17 | 5.8 (+/-1.6) | 16.9 (+/-4.1) | 25.5 (+/-5.0) | 38.3 (+/-4.1) | 44.0 (+/-4.1) | 95.1 (+/-0.9) | |||||||||||||||||||||||||
PSI-BLAST | 5 | 3.2 (+/-0.5) | 3 | 2.6 (+/-0.2) | 5 | -6.3 (+/-2.3) | 8 | 1.1 (+/-1.3) | 8.8 (+/-2.3) | 13.6 (+/-3.3) | 18.0 (+/-2.8) | 20.4 (+/-2.9) | 36.8 (+/-4.1) | |||||||||||||||||||||||||
SAMt99 | 13 | 6.1 (+/-1.0) | 9 | 3.0 (+/-0.3) | 10 | 2.2 (+/-2.8) | 14 | 4.6 (+/-1.6) | 17.6 (+/-4.2) | 23.6 (+/-5.1) | 29.7 (+/-4.2) | 34.0 (+/-4.2) | 59.1 (+/-4.6) | |||||||||||||||||||||||||
ssearch | 3 | 3.1 (+/-0.6) | 2 | 2.7 (+/-0.2) | 1 | -3.4 (+/-0.8) | 9 | 0.8 (+/-1.0) | 5.5 (+/-2.1) | 10.3 (+/-3.0) | 25.0 (+/-2.7) | 31.6 (+/-2.8) | 89.9 (+/-2.4) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 59 | 1 | 3D-PSSM | 39 | 9.3 (+/-0.9) | 25 | 3.5 (+/-0.1) | 20 | -0.1 (+/-1.3) | 42 | 7.5 (+/-1.3) | 28.7 (+/-3.6) | 37.1 (+/-4.0) | 46.0 (+/-3.2) | 51.3 (+/-3.3) | 86.2 (+/-1.7) | ||||||||||||||||||||||
BLAST | 14 | 3.3 (+/-0.3) | 8 | 2.6 (+/-0.1) | 9 | -7.6 (+/-1.9) | 24 | 1.9 (+/-1.2) | 16.5 (+/-3.2) | 20.7 (+/-3.4) | 24.6 (+/-2.9) | 28.7 (+/-3.2) | 43.9 (+/-3.4) | |||||||||||||||||||||||||
FUGUE | 36 | 8.4 (+/-0.9) | 27 | 3.6 (+/-0.1) | 20 | 0.4 (+/-1.2) | 43 | 7.6 (+/-1.2) | 26.0 (+/-3.6) | 35.2 (+/-4.1) | 45.4 (+/-3.1) | 51.2 (+/-3.1) | 94.9 (+/-1.3) | |||||||||||||||||||||||||
PSI-BLAST | 20 | 4.2 (+/-0.5) | 8 | 2.7 (+/-0.1) | 7 | -11.0 (+/-1.7) | 21 | 0.6 (+/-1.1) | 15.7 (+/-2.5) | 20.8 (+/-2.9) | 23.5 (+/-2.6) | 26.4 (+/-2.8) | 38.5 (+/-3.1) | |||||||||||||||||||||||||
SAMt99 | 35 | 7.1 (+/-0.7) | 22 | 3.3 (+/-0.2) | 15 | -1.6 (+/-1.7) | 39 | 7.1 (+/-1.4) | 25.8 (+/-3.8) | 32.2 (+/-4.1) | 39.3 (+/-3.6) | 44.0 (+/-3.7) | 65.8 (+/-3.8) | |||||||||||||||||||||||||
ssearch | 23 | 5.7 (+/-0.8) | 17 | 3.1 (+/-0.2) | 10 | -1.5 (+/-1.2) | 26 | 4.2 (+/-1.4) | 18.3 (+/-3.6) | 24.9 (+/-4.1) | 36.6 (+/-3.4) | 42.0 (+/-3.5) | 91.7 (+/-1.3) | |||||||||||||||||||||||||
Superfamily | 27 | 6.0 (+/-0.7) | 14 | 3.1 (+/-0.1) | 11 | -1.6 (+/-1.3) | 33 | 4.4 (+/-1.3) | 21.9 (+/-3.8) | 28.8 (+/-4.2) | 35.9 (+/-3.4) | 40.6 (+/-3.5) | 85.8 (+/-1.1) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 144 | 1 | 3D-PSSM | 99 | 8.8 (+/-0.5) | 58 | 3.5 (+/-0.1) | 63 | 2.2 (+/-0.8) | 107 | 8.2 (+/-0.8) | 26.9 (+/-2.3) | 35.6 (+/-2.5) | 46.0 (+/-2.0) | 51.5 (+/-2.0) | 85.9 (+/-1.1) | ||||||||||||||||||||||
BLAST | 25 | 3.0 (+/-0.2) | 11 | 2.5 (+/-0.1) | 25 | -6.2 (+/-1.1) | 44 | 1.4 (+/-0.7) | 14.1 (+/-2.0) | 17.8 (+/-2.1) | 23.2 (+/-1.8) | 26.9 (+/-1.9) | 43.9 (+/-2.0) | |||||||||||||||||||||||||
FUGUE | 96 | 8.3 (+/-0.5) | 69 | 3.7 (+/-0.1) | 65 | 2.8 (+/-0.8) | 110 | 8.8 (+/-0.8) | 25.0 (+/-2.4) | 33.5 (+/-2.6) | 47.1 (+/-2.0) | 52.7 (+/-2.0) | 95.2 (+/-0.8) | |||||||||||||||||||||||||
PSI-BLAST | 42 | 3.9 (+/-0.3) | 16 | 2.6 (+/-0.1) | 28 | -7.5 (+/-1.2) | 49 | 1.3 (+/-0.7) | 15.5 (+/-1.8) | 19.9 (+/-1.9) | 23.1 (+/-1.8) | 25.7 (+/-1.9) | 39.4 (+/-2.0) | |||||||||||||||||||||||||
SAMt99 | 83 | 6.8 (+/-0.4) | 48 | 3.2 (+/-0.1) | 49 | 0.6 (+/-1.1) | 88 | 6.8 (+/-0.8) | 25.3 (+/-2.4) | 31.3 (+/-2.6) | 38.6 (+/-2.2) | 43.2 (+/-2.3) | 67.0 (+/-2.3) | |||||||||||||||||||||||||
ssearch | 48 | 4.6 (+/-0.4) | 31 | 3.0 (+/-0.1) | 29 | -0.4 (+/-0.7) | 63 | 4.5 (+/-0.8) | 16.7 (+/-2.3) | 22.1 (+/-2.6) | 34.9 (+/-2.1) | 40.4 (+/-2.2) | 90.5 (+/-1.0) |