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EVA: explain threading prediction scores



subset   subset of proteins common to all prediction methods applied
nprot   number of proteins in subset of proteins common to all prediction methods applied
Method   name of prediction method
-lnP_MMT   negative log of P-value assigned to model structure by MAMMOTH
Sgnf(-lnP_MMT)   number of medels achieving -ln(P-value) score from MAMMOTH above a value of 4.5
Z_CE   Z-score assigned to a model structure by CE
Sgnf(Z_CE)   number of models achieving CE Z-score above a value of 3.7
Q_LG1   quality score of a model structure from LG1 program
Sgnf(Q_LG1)   number of medels achieving LG1 Q-score above a value of 2.0
Q_LG2   quality score of a model structure from LG2 program
Sgnf(Q_LG2)   number of medels achieving LG2 Q-score above a value of 2.0
NXA_Gbl%   percentage of equivalent residues within a distance of X Angstroms in a global superposition of model and experimental structures
NXA_ext_CE%   percentage of target residues found within a distance of X Angstroms in structural alignment of model and target structures seeded by CE and extended iteratively
ModN%   percent of target residues in model produced by method
score   Let Nb - number of times server is signinficantly better than other servers. Let Nw - number of times server is signinficantly worse than other servers. Let N -number of times a comparison can be made. Than: score = 10 * ( Nb - Nw )/N . The significance is computed using Student t-distribution




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