Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 842 | 268 | method/index.html | ||
3D-PSSM | 561 | 211 | method/3dpssm.html | ||
BLAST | 819 | 264 | method/blast.html | ||
FUGUE | 669 | 227 | method/fugue.html | ||
Libellula | 93 | 49 | method/libellula.html | ||
Prospect | 142 | 58 | method/prospect.html | ||
PSI-BLAST | 825 | 267 | method/psiblast.html | ||
SAMt99 | 367 | 163 | method/samt99.html | ||
ssearch | 818 | 264 | method/ssearch.html | ||
Superfamily | 309 | 102 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 31 | 1 | 3D-PSSM | 25 | 12.1 (+/-1.2) | 20 | 4.1 (+/-0.2) | 17 | 5.3 (+/-1.7) | 25 | 12.4 (+/-1.9) | 36.0 (+/-5.2) | 46.1 (+/-5.6) | 53.0 (+/-4.7) | 57.8 (+/-4.6) | 86.3 (+/-2.4) | ||||||||||||||||||||||
BLAST | 11 | 6.0 (+/-1.0) | 8 | 3.1 (+/-0.2) | 8 | -1.9 (+/-2.4) | 12 | 6.1 (+/-2.1) | 19.1 (+/-4.8) | 22.9 (+/-5.1) | 29.7 (+/-4.7) | 33.0 (+/-4.7) | 49.5 (+/-4.6) | |||||||||||||||||||||||||
FUGUE | 26 | 12.3 (+/-1.2) | 17 | 4.1 (+/-0.2) | 19 | 5.4 (+/-1.6) | 26 | 12.0 (+/-1.7) | 33.5 (+/-5.1) | 43.2 (+/-5.7) | 53.7 (+/-4.4) | 59.1 (+/-4.2) | 93.0 (+/-1.6) | |||||||||||||||||||||||||
Libellula | 24 | 12.3 (+/-1.4) | 16 | 3.6 (+/-0.3) | 18 | 9.5 (+/-2.4) | 25 | 12.2 (+/-1.8) | 36.1 (+/-5.4) | 44.9 (+/-5.7) | 46.9 (+/-4.9) | 52.5 (+/-5.1) | 94.6 (+/-1.9) | |||||||||||||||||||||||||
Prospect | 22 | 10.7 (+/-1.3) | 19 | 4.1 (+/-0.2) | 17 | 6.0 (+/-1.9) | 25 | 11.6 (+/-1.8) | 29.7 (+/-5.2) | 38.2 (+/-5.5) | 49.4 (+/-4.4) | 54.5 (+/-4.4) | 92.0 (+/-1.6) | |||||||||||||||||||||||||
PSI-BLAST | 14 | 7.8 (+/-1.4) | 11 | 3.4 (+/-0.3) | 8 | -1.8 (+/-2.2) | 15 | 7.2 (+/-2.1) | 23.6 (+/-5.3) | 29.4 (+/-5.5) | 33.2 (+/-5.3) | 36.8 (+/-5.5) | 53.1 (+/-5.5) | |||||||||||||||||||||||||
SAMt99 | 22 | 10.5 (+/-1.5) | 17 | 3.9 (+/-0.3) | 15 | 4.8 (+/-2.4) | 23 | 10.5 (+/-1.8) | 32.9 (+/-5.5) | 39.7 (+/-6.0) | 45.3 (+/-5.0) | 49.5 (+/-5.1) | 68.2 (+/-4.7) | |||||||||||||||||||||||||
ssearch | 14 | 8.4 (+/-1.3) | 14 | 3.7 (+/-0.2) | 8 | 0.3 (+/-1.3) | 20 | 8.7 (+/-2.0) | 22.5 (+/-5.3) | 29.2 (+/-5.8) | 43.3 (+/-4.8) | 48.7 (+/-4.7) | 91.7 (+/-2.2) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 119 | 1 | 3D-PSSM | 104 | 13.8 (+/-0.7) | 88 | 4.4 (+/-0.1) | 53 | 3.5 (+/-1.1) | 106 | 14.1 (+/-0.9) | 42.9 (+/-2.3) | 53.1 (+/-2.4) | 59.5 (+/-1.9) | 64.6 (+/-2.0) | 89.1 (+/-1.0) | ||||||||||||||||||||||
BLAST | 63 | 6.7 (+/-0.5) | 46 | 3.3 (+/-0.1) | 34 | -1.0 (+/-1.5) | 75 | 8.0 (+/-1.0) | 27.3 (+/-2.5) | 32.0 (+/-2.7) | 35.3 (+/-2.4) | 38.6 (+/-2.4) | 50.2 (+/-2.4) | |||||||||||||||||||||||||
FUGUE | 99 | 12.7 (+/-0.7) | 82 | 4.4 (+/-0.1) | 51 | 3.0 (+/-1.0) | 110 | 13.9 (+/-0.8) | 38.1 (+/-2.6) | 48.4 (+/-2.7) | 58.3 (+/-1.9) | 63.7 (+/-1.9) | 95.3 (+/-0.8) | |||||||||||||||||||||||||
PSI-BLAST | 90 | 10.8 (+/-0.7) | 73 | 4.0 (+/-0.1) | 40 | -1.1 (+/-1.4) | 91 | 10.4 (+/-1.0) | 35.7 (+/-2.4) | 43.2 (+/-2.5) | 46.3 (+/-2.4) | 49.9 (+/-2.4) | 60.4 (+/-2.5) | |||||||||||||||||||||||||
SAMt99 | 101 | 12.5 (+/-0.7) | 80 | 4.3 (+/-0.1) | 52 | 2.9 (+/-1.2) | 106 | 13.7 (+/-0.9) | 40.6 (+/-2.6) | 49.5 (+/-2.7) | 55.6 (+/-2.2) | 60.4 (+/-2.3) | 77.4 (+/-2.2) | |||||||||||||||||||||||||
ssearch | 79 | 10.1 (+/-0.7) | 66 | 3.9 (+/-0.1) | 36 | 1.7 (+/-1.0) | 85 | 11.2 (+/-1.1) | 29.9 (+/-2.8) | 38.5 (+/-3.0) | 50.5 (+/-2.5) | 55.8 (+/-2.5) | 89.8 (+/-1.2) | |||||||||||||||||||||||||
Superfamily | 93 | 10.9 (+/-0.6) | 70 | 4.0 (+/-0.1) | 44 | 2.2 (+/-1.1) | 97 | 11.5 (+/-1.0) | 36.9 (+/-2.7) | 44.4 (+/-2.9) | 50.4 (+/-2.3) | 54.9 (+/-2.3) | 87.0 (+/-0.8) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 268 | 1 | 3D-PSSM | 226 | 12.3 (+/-0.4) | 181 | 4.2 (+/-0.1) | 125 | 3.9 (+/-0.7) | 232 | 13.1 (+/-0.6) | 38.7 (+/-1.7) | 48.7 (+/-1.8) | 56.9 (+/-1.4) | 62.0 (+/-1.4) | 88.4 (+/-0.7) | ||||||||||||||||||||||
BLAST | 122 | 6.0 (+/-0.3) | 87 | 3.2 (+/-0.1) | 77 | -1.2 (+/-1.0) | 141 | 6.5 (+/-0.6) | 24.3 (+/-1.7) | 28.7 (+/-1.8) | 33.0 (+/-1.6) | 36.1 (+/-1.6) | 50.0 (+/-1.5) | |||||||||||||||||||||||||
FUGUE | 221 | 11.6 (+/-0.4) | 171 | 4.3 (+/-0.1) | 127 | 3.8 (+/-0.6) | 239 | 13.2 (+/-0.6) | 35.6 (+/-1.8) | 45.2 (+/-1.9) | 56.5 (+/-1.4) | 61.9 (+/-1.3) | 95.4 (+/-0.5) | |||||||||||||||||||||||||
PSI-BLAST | 173 | 9.2 (+/-0.4) | 130 | 3.6 (+/-0.1) | 88 | -1.4 (+/-1.0) | 181 | 9.1 (+/-0.7) | 31.8 (+/-1.7) | 38.2 (+/-1.8) | 41.6 (+/-1.7) | 45.0 (+/-1.7) | 57.0 (+/-1.7) | |||||||||||||||||||||||||
SAMt99 | 210 | 11.1 (+/-0.4) | 164 | 4.0 (+/-0.1) | 115 | 2.9 (+/-0.8) | 218 | 12.2 (+/-0.6) | 37.8 (+/-1.8) | 45.6 (+/-1.9) | 51.9 (+/-1.6) | 56.4 (+/-1.6) | 75.5 (+/-1.5) | |||||||||||||||||||||||||
ssearch | 158 | 8.6 (+/-0.4) | 130 | 3.7 (+/-0.1) | 82 | 1.7 (+/-0.6) | 175 | 10.0 (+/-0.7) | 26.8 (+/-1.9) | 34.5 (+/-2.0) | 47.3 (+/-1.7) | 52.5 (+/-1.7) | 90.6 (+/-0.8) |