Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 835 | 266 | method/index.html | ||
3D-PSSM | 548 | 200 | method/3dpssm.html | ||
BLAST | 812 | 262 | method/blast.html | ||
FUGUE | 649 | 214 | method/fugue.html | ||
Libellula | 81 | 39 | method/libellula.html | ||
Prospect | 130 | 47 | method/prospect.html | ||
PSI-BLAST | 302 | 132 | method/psiblast.html | ||
SAMt99 | 354 | 151 | method/samt99.html | ||
ssearch | 563 | 200 | method/ssearch.html | ||
Superfamily | 306 | 101 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 15 | 1 | 3D-PSSM | 13 | 11.9 (+/-1.6) | 10 | 4.0 (+/-0.3) | 7 | 5.9 (+/-2.7) | 12 | 11.1 (+/-2.4) | 31.8 (+/-7.2) | 41.9 (+/-7.9) | 49.4 (+/-7.0) | 54.6 (+/-7.0) | 84.7 (+/-3.8) | ||||||||||||||||||||||
BLAST | 5 | 5.0 (+/-1.2) | 4 | 2.9 (+/-0.3) | 4 | 0.4 (+/-4.1) | 5 | 4.4 (+/-2.3) | 15.3 (+/-5.8) | 18.0 (+/-6.3) | 24.1 (+/-5.9) | 27.1 (+/-6.0) | 43.6 (+/-6.1) | |||||||||||||||||||||||||
FUGUE | 12 | 11.9 (+/-1.9) | 8 | 4.0 (+/-0.3) | 9 | 5.6 (+/-2.2) | 13 | 10.6 (+/-1.9) | 30.5 (+/-6.9) | 39.4 (+/-7.8) | 48.1 (+/-6.7) | 53.9 (+/-6.6) | 91.7 (+/-2.8) | |||||||||||||||||||||||||
Libellula | 11 | 12.2 (+/-2.2) | 7 | 3.5 (+/-0.5) | 10 | 10.8 (+/-2.8) | 11 | 11.0 (+/-2.5) | 34.4 (+/-7.8) | 42.2 (+/-8.4) | 42.4 (+/-7.8) | 48.3 (+/-7.9) | 95.9 (+/-3.2) | |||||||||||||||||||||||||
Prospect | 10 | 9.9 (+/-1.9) | 9 | 3.8 (+/-0.3) | 8 | 4.7 (+/-2.3) | 12 | 9.8 (+/-2.2) | 27.1 (+/-7.4) | 34.7 (+/-8.3) | 46.5 (+/-6.7) | 51.8 (+/-6.6) | 89.1 (+/-2.7) | |||||||||||||||||||||||||
PSI-BLAST | 7 | 7.1 (+/-1.8) | 6 | 3.3 (+/-0.3) | 3 | -0.6 (+/-3.8) | 8 | 6.3 (+/-2.4) | 19.1 (+/-6.4) | 24.3 (+/-7.0) | 28.5 (+/-6.9) | 31.3 (+/-7.3) | 49.7 (+/-8.1) | |||||||||||||||||||||||||
SAMt99 | 11 | 11.2 (+/-2.2) | 9 | 3.9 (+/-0.4) | 8 | 4.7 (+/-2.8) | 10 | 9.2 (+/-2.1) | 28.5 (+/-7.3) | 35.8 (+/-8.2) | 42.9 (+/-6.9) | 47.9 (+/-7.2) | 68.8 (+/-6.8) | |||||||||||||||||||||||||
ssearch | 7 | 8.2 (+/-1.8) | 7 | 3.5 (+/-0.4) | 4 | 1.7 (+/-2.2) | 8 | 7.0 (+/-2.4) | 19.2 (+/-6.9) | 24.9 (+/-7.8) | 39.9 (+/-6.8) | 45.6 (+/-6.7) | 93.2 (+/-2.5) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 10 | 1 | 3D-PSSM | 7 | 12.9 (+/-2.8) | 6 | 4.0 (+/-0.4) | 3 | 2.4 (+/-2.8) | 7 | 11.2 (+/-2.3) | 32.4 (+/-7.6) | 39.2 (+/-9.1) | 49.0 (+/-7.2) | 53.5 (+/-7.3) | 85.5 (+/-2.6) | ||||||||||||||||||||||
BLAST | 5 | 7.3 (+/-2.1) | 4 | 3.0 (+/-0.4) | 3 | -0.9 (+/-4.4) | 6 | 4.8 (+/-2.3) | 15.2 (+/-5.7) | 20.0 (+/-6.2) | 27.3 (+/-5.7) | 31.3 (+/-6.1) | 42.6 (+/-7.2) | |||||||||||||||||||||||||
FUGUE | 8 | 13.0 (+/-2.9) | 6 | 4.3 (+/-0.4) | 3 | 4.0 (+/-3.4) | 8 | 10.9 (+/-2.1) | 26.3 (+/-6.5) | 35.3 (+/-7.5) | 46.6 (+/-6.0) | 51.6 (+/-5.7) | 95.8 (+/-1.4) | |||||||||||||||||||||||||
PSI-BLAST | 6 | 11.2 (+/-3.1) | 4 | 3.6 (+/-0.5) | 2 | -2.0 (+/-3.4) | 6 | 6.0 (+/-2.4) | 20.8 (+/-5.6) | 27.6 (+/-6.3) | 33.5 (+/-6.0) | 38.3 (+/-6.7) | 54.1 (+/-8.0) | |||||||||||||||||||||||||
SAMt99 | 7 | 10.7 (+/-2.8) | 4 | 3.6 (+/-0.4) | 2 | -0.8 (+/-3.1) | 7 | 7.8 (+/-2.4) | 18.1 (+/-6.2) | 24.1 (+/-6.7) | 37.0 (+/-6.6) | 42.1 (+/-7.2) | 67.7 (+/-7.9) | |||||||||||||||||||||||||
ssearch | 6 | 10.9 (+/-3.2) | 5 | 3.5 (+/-0.6) | 2 | -0.0 (+/-1.9) | 6 | 6.8 (+/-2.2) | 10.8 (+/-3.9) | 17.0 (+/-4.9) | 37.6 (+/-7.0) | 43.4 (+/-7.1) | 91.4 (+/-2.6) | |||||||||||||||||||||||||
Superfamily | 7 | 10.1 (+/-2.5) | 6 | 3.8 (+/-0.3) | 2 | 3.2 (+/-4.1) | 7 | 7.6 (+/-2.3) | 21.4 (+/-6.5) | 26.0 (+/-7.2) | 35.0 (+/-6.5) | 39.1 (+/-6.5) | 85.5 (+/-2.9) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 47 | 1 | 3D-PSSM | 35 | 11.1 (+/-1.0) | 27 | 4.0 (+/-0.2) | 23 | 5.5 (+/-1.6) | 37 | 11.0 (+/-1.3) | 37.0 (+/-4.3) | 46.5 (+/-4.6) | 52.9 (+/-3.6) | 58.2 (+/-3.7) | 86.8 (+/-1.9) | ||||||||||||||||||||||
BLAST | 17 | 5.5 (+/-0.8) | 13 | 3.0 (+/-0.1) | 16 | 1.2 (+/-2.4) | 21 | 4.8 (+/-1.3) | 21.1 (+/-3.9) | 24.7 (+/-4.1) | 30.9 (+/-3.7) | 34.2 (+/-3.7) | 48.9 (+/-3.7) | |||||||||||||||||||||||||
FUGUE | 35 | 10.7 (+/-1.1) | 25 | 4.1 (+/-0.2) | 27 | 6.7 (+/-1.5) | 40 | 10.8 (+/-1.1) | 33.8 (+/-4.2) | 43.0 (+/-4.6) | 51.4 (+/-3.6) | 57.1 (+/-3.6) | 93.2 (+/-1.7) | |||||||||||||||||||||||||
PSI-BLAST | 22 | 7.8 (+/-1.1) | 17 | 3.2 (+/-0.2) | 15 | -1.3 (+/-2.7) | 28 | 6.9 (+/-1.4) | 26.9 (+/-4.1) | 32.7 (+/-4.4) | 35.9 (+/-4.1) | 39.3 (+/-4.3) | 53.8 (+/-4.2) | |||||||||||||||||||||||||
SAMt99 | 32 | 10.1 (+/-1.1) | 23 | 3.8 (+/-0.2) | 21 | 3.3 (+/-1.9) | 33 | 9.1 (+/-1.2) | 32.1 (+/-4.4) | 39.1 (+/-4.6) | 46.6 (+/-3.8) | 51.2 (+/-3.9) | 72.8 (+/-3.7) | |||||||||||||||||||||||||
ssearch | 26 | 8.2 (+/-1.1) | 20 | 3.5 (+/-0.2) | 16 | 2.8 (+/-1.4) | 29 | 8.0 (+/-1.3) | 22.2 (+/-4.2) | 28.8 (+/-4.6) | 43.7 (+/-3.9) | 49.7 (+/-3.9) | 92.2 (+/-1.6) |