Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 789 | 251 | method/index.html | ||
3D-PSSM | 523 | 195 | method/3dpssm.html | ||
BLAST | 575 | 217 | method/blast.html | ||
FUGUE | 442 | 176 | method/fugue.html | ||
Libellula | 81 | 39 | method/libellula.html | ||
Prospect | 122 | 46 | method/prospect.html | ||
PSI-BLAST | 609 | 226 | method/psiblast.html | ||
SAMt99 | 351 | 148 | method/samt99.html | ||
ssearch | 439 | 188 | method/ssearch.html | ||
Superfamily | 221 | 87 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 20 | 1 | 3D-PSSM | 16 | 12.8 (+/-1.7) | 11 | 3.6 (+/-0.3) | 13 | 6.8 (+/-2.2) | 16 | 12.0 (+/-2.0) | 35.4 (+/-6.3) | 44.1 (+/-7.0) | 46.0 (+/-6.1) | 51.6 (+/-6.2) | 85.4 (+/-3.4) | ||||||||||||||||||||||
BLAST | 8 | 6.1 (+/-1.2) | 5 | 3.1 (+/-0.3) | 7 | 1.7 (+/-3.3) | 9 | 5.7 (+/-1.9) | 17.7 (+/-4.8) | 21.0 (+/-5.1) | 23.3 (+/-4.6) | 26.3 (+/-4.5) | 45.8 (+/-4.9) | |||||||||||||||||||||||||
FUGUE | 17 | 12.9 (+/-1.6) | 13 | 3.9 (+/-0.2) | 14 | 7.4 (+/-1.9) | 18 | 11.8 (+/-1.7) | 30.9 (+/-5.9) | 40.5 (+/-6.9) | 45.3 (+/-5.0) | 52.8 (+/-5.6) | 93.2 (+/-2.0) | |||||||||||||||||||||||||
Libellula | 15 | 13.3 (+/-2.0) | 8 | 3.5 (+/-0.3) | 11 | 8.3 (+/-2.6) | 16 | 11.8 (+/-1.9) | 34.6 (+/-6.6) | 42.7 (+/-7.1) | 47.0 (+/-5.8) | 53.0 (+/-5.9) | 94.6 (+/-2.7) | |||||||||||||||||||||||||
Prospect | 14 | 11.3 (+/-1.8) | 12 | 3.6 (+/-0.3) | 12 | 7.4 (+/-2.3) | 16 | 10.8 (+/-1.8) | 28.4 (+/-6.0) | 36.8 (+/-6.6) | 43.0 (+/-5.8) | 49.3 (+/-5.9) | 127.9 (+/-14.3) | |||||||||||||||||||||||||
PSI-BLAST | 11 | 9.3 (+/-1.9) | 7 | 3.5 (+/-0.2) | 7 | 1.6 (+/-3.6) | 12 | 7.9 (+/-2.3) | 25.0 (+/-5.7) | 29.8 (+/-6.1) | 31.6 (+/-5.9) | 34.6 (+/-6.1) | 52.5 (+/-6.9) | |||||||||||||||||||||||||
SAMt99 | 13 | 11.2 (+/-2.2) | 6 | 3.2 (+/-0.4) | 10 | 4.7 (+/-2.6) | 15 | 9.6 (+/-1.9) | 30.8 (+/-6.7) | 37.0 (+/-7.4) | 39.5 (+/-6.7) | 44.1 (+/-6.8) | 70.4 (+/-5.4) | |||||||||||||||||||||||||
ssearch | 8 | 8.4 (+/-1.8) | 5 | 3.3 (+/-0.2) | 7 | 1.7 (+/-1.9) | 13 | 7.7 (+/-2.1) | 20.0 (+/-5.9) | 26.4 (+/-6.7) | 37.4 (+/-5.8) | 43.0 (+/-5.6) | 92.3 (+/-2.4) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 48 | 1 | 3D-PSSM | 40 | 10.5 (+/-0.8) | 25 | 3.6 (+/-0.2) | 28 | 6.4 (+/-2.1) | 41 | 14.3 (+/-1.7) | 46.2 (+/-3.7) | 55.8 (+/-3.8) | 52.2 (+/-4.0) | 58.3 (+/-4.0) | 90.6 (+/-1.2) | ||||||||||||||||||||||
BLAST | 26 | 6.3 (+/-0.6) | 21 | 3.3 (+/-0.2) | 20 | 2.1 (+/-3.0) | 35 | 9.7 (+/-1.8) | 33.7 (+/-3.9) | 39.8 (+/-4.1) | 39.9 (+/-3.8) | 43.6 (+/-3.9) | 58.9 (+/-3.6) | |||||||||||||||||||||||||
FUGUE | 39 | 9.9 (+/-0.7) | 24 | 3.7 (+/-0.2) | 28 | 6.4 (+/-1.9) | 45 | 14.9 (+/-1.5) | 44.3 (+/-4.0) | 54.7 (+/-4.0) | 56.7 (+/-3.3) | 62.2 (+/-3.3) | 95.8 (+/-1.2) | |||||||||||||||||||||||||
PSI-BLAST | 31 | 7.9 (+/-0.8) | 18 | 3.4 (+/-0.2) | 23 | 0.3 (+/-2.5) | 34 | 10.2 (+/-1.9) | 36.6 (+/-3.9) | 44.9 (+/-3.8) | 46.6 (+/-3.6) | 50.9 (+/-3.7) | 66.6 (+/-3.6) | |||||||||||||||||||||||||
SAMt99 | 38 | 9.6 (+/-0.8) | 25 | 3.6 (+/-0.2) | 27 | 6.6 (+/-2.2) | 43 | 15.1 (+/-1.6) | 44.1 (+/-4.2) | 53.1 (+/-4.1) | 54.9 (+/-3.9) | 59.4 (+/-3.9) | 83.9 (+/-2.8) | |||||||||||||||||||||||||
ssearch | 32 | 8.2 (+/-0.8) | 25 | 3.5 (+/-0.2) | 22 | 4.0 (+/-2.0) | 37 | 12.7 (+/-1.9) | 36.1 (+/-4.5) | 45.9 (+/-4.6) | 52.7 (+/-4.1) | 57.6 (+/-3.9) | 92.8 (+/-1.4) | |||||||||||||||||||||||||
Superfamily | 33 | 8.3 (+/-0.7) | 19 | 3.3 (+/-0.2) | 24 | 6.1 (+/-2.0) | 38 | 12.1 (+/-1.9) | 39.9 (+/-4.5) | 47.8 (+/-4.5) | 51.2 (+/-3.8) | 57.2 (+/-3.5) | 169.9 (+/-11.0) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 120 | 1 | 3D-PSSM | 97 | 11.2 (+/-0.6) | 54 | 3.5 (+/-0.1) | 59 | 4.1 (+/-1.1) | 101 | 12.9 (+/-1.0) | 38.1 (+/-2.6) | 47.4 (+/-2.7) | 46.5 (+/-2.6) | 52.4 (+/-2.6) | 88.1 (+/-1.0) | ||||||||||||||||||||||
BLAST | 60 | 6.4 (+/-0.5) | 42 | 3.2 (+/-0.1) | 40 | -0.3 (+/-1.5) | 69 | 7.0 (+/-1.0) | 25.5 (+/-2.4) | 30.4 (+/-2.6) | 32.5 (+/-2.3) | 35.9 (+/-2.3) | 53.3 (+/-2.2) | |||||||||||||||||||||||||
FUGUE | 99 | 10.9 (+/-0.6) | 61 | 3.7 (+/-0.1) | 60 | 4.2 (+/-1.0) | 107 | 13.4 (+/-0.9) | 36.7 (+/-2.6) | 46.6 (+/-2.8) | 50.5 (+/-2.3) | 56.5 (+/-2.3) | 95.3 (+/-0.7) | |||||||||||||||||||||||||
PSI-BLAST | 74 | 8.7 (+/-0.6) | 48 | 3.4 (+/-0.1) | 43 | -1.4 (+/-1.5) | 82 | 9.3 (+/-1.1) | 32.3 (+/-2.5) | 39.1 (+/-2.6) | 39.6 (+/-2.6) | 43.1 (+/-2.6) | 59.2 (+/-2.5) | |||||||||||||||||||||||||
SAMt99 | 90 | 10.4 (+/-0.7) | 55 | 3.5 (+/-0.1) | 52 | 2.8 (+/-1.3) | 98 | 12.3 (+/-1.0) | 36.9 (+/-2.8) | 44.7 (+/-2.9) | 46.0 (+/-2.7) | 51.1 (+/-2.7) | 76.7 (+/-2.2) | |||||||||||||||||||||||||
ssearch | 72 | 8.5 (+/-0.6) | 48 | 3.4 (+/-0.1) | 40 | 1.7 (+/-1.0) | 80 | 10.1 (+/-1.1) | 28.2 (+/-2.8) | 36.1 (+/-3.0) | 44.7 (+/-2.6) | 49.9 (+/-2.6) | 91.9 (+/-1.0) |