METHOD about: | ../../../doc/explain_methods.html#PX_about_jpred |
METHOD url: | JPred |
TYPE : | sec |
NPROT : | 1218 |
NWEEKS : | 106 |
NOTE 1 : | here ALL results obtained for JPred in month 2001_12 are given, i.e. NOT those for a common subset! |
NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
type | date | sots | id | Q3 | Q3H%o | Q3H%p | Q3E%o | Q3E%p | Q3L%o | Q3L%p | sov | sovH | sovE | sovL | BAD | info | infoO | infoP | corrH | corrE | corrL | class | contDH | contDE |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
sec | 2001_12 | dssp | ALL_proteins:psum | 73.8 | 71 | 85 | 59 | 74 | 84 | 67 | 69.2 | 65.7 | 66.3 | 68.3 | 2.5 | 0.34 | 0.33 | 0.35 | 0.67 | 0.58 | 0.54 | 7980.3 | 8.3 | 6.8 |
sec | 2001_12 | dssp | ALL_proteins:sig | 9.6 | 31 | 35 | 30 | 36 | 11 | 12 | 15.0 | 29.3 | 26.4 | 14.8 | 4.0 | 0.13 | 0.14 | 0.14 | 0.23 | 0.25 | 0.16 | 7903.8 | 8.2 | 7.2 |
sec | 2001_12 | dssp | ALL_proteins:errsig | 0.27 | 0.91 | 1 | 0.86 | 1 | 0.32 | 0.35 | 0.43 | 0.84 | 0.75 | 0.42 | 0.11 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 226.4 | 0.23 | 0.20 |
sec | 2001_12 | dssp | THIS_month:psum | 73.7 | 56 | 69 | 48 | 61 | 84 | 66 | 68.8 | 60.3 | 63.8 | 69.4 | 2.5 | 0.33 | 0.31 | 0.35 | 0.71 | 0.60 | 0.52 | 74.3 | 9.4 | 6.5 |
sec | 2001_12 | dssp | 1ci8:A | 74.8 | 66 | 93 | 42 | 85 | 94 | 66 | 54.9 | 76 | 48 | 41 | 0.2 | 0.38 | 0.34 | 0.42 | 0.70 | 0.54 | 0.55 | 100.0 | 10.0 | 9.0 |
sec | 2001_12 | dssp | 1ci9:A | 74.0 | 63 | 96 | 43 | 86 | 95 | 63 | 54.9 | 72 | 49 | 42 | 0.2 | 0.39 | 0.35 | 0.43 | 0.70 | 0.55 | 0.55 | 100.0 | 12.0 | 9.0 |
sec | 2001_12 | dssp | 1geh:A | 70.4 | 75 | 73 | 43 | 60 | 77 | 69 | 71.2 | 83 | 50 | 68 | 6.9 | 0.23 | 0.23 | 0.24 | 0.56 | 0.42 | 0.54 | 100.0 | 0.00 | 5.0 |
sec | 2001_12 | dssp | 1gjz:A | 86.8 | 100 | 84 | 85 | 75 | 82 | 95 | 94.0 | 100 | 84 | 96 | 1.8 | 0.61 | 0.62 | 0.60 | 0.89 | 0.72 | 0.78 | 100.0 | 3.0 | 3.0 |
sec | 2001_12 | dssp | 1gkk:A | 70.7 | 39 | 94 | 64 | 74 | 94 | 65 | 65.4 | 46 | 79 | 71 | 2.8 | 0.31 | 0.28 | 0.35 | 0.52 | 0.62 | 0.53 | 100.0 | 19.0 | 2.0 |
sec | 2001_12 | dssp | 1gkl:A | 70.7 | 58 | 77 | 55 | 81 | 85 | 65 | 70.7 | 73 | 67 | 70 | 0.7 | 0.28 | 0.27 | 0.30 | 0.55 | 0.61 | 0.45 | 100.0 | 8.0 | 6.0 |
sec | 2001_12 | dssp | 1gl8:A | 73.1 | 70 | 80 | 76 | 86 | 73 | 60 | 74.9 | 73 | 82 | 71 | 0.0 | 0.39 | 0.39 | 0.40 | 0.60 | 0.76 | 0.44 | 100.0 | 4.0 | 2.0 |
sec | 2001_12 | dssp | 1gmx:A | 73.1 | 66 | 100 | 57 | 75 | 89 | 58 | 69.6 | 77 | 57 | 67 | 0.0 | 0.43 | 0.41 | 0.45 | 0.72 | 0.58 | 0.51 | 100.0 | 14.0 | 4.0 |
sec | 2001_12 | dssp | 1gn0:A | 74.1 | 68 | 96 | 57 | 75 | 88 | 61 | 67.9 | 75 | 57 | 65 | 0.0 | 0.40 | 0.39 | 0.43 | 0.72 | 0.58 | 0.52 | 100.0 | 12.0 | 4.0 |
sec | 2001_12 | dssp | 1go3:F | 77.6 | 92 | 81 | 0 | 0 | 67 | 69 | 87.4 | 98 | 0 | 86 | 2.8 | 0.28 | 0.24 | 0.33 | 0.62 | 1.0 | 0.54 | 0.0 | 8.0 | 7.0 |
sec | 2001_12 | dssp | 1go3:N | 78.3 | 91 | 85 | 12 | 100 | 67 | 61 | 87.5 | 99 | 12 | 82 | 0.0 | 0.36 | 0.32 | 0.41 | 0.67 | 0.34 | 0.49 | 0.0 | 3.0 | 6.0 |
sec | 2001_12 | dssp | 1h6i:A | 69.8 | 59 | 94 | 0 | 0 | 90 | 70 | 77.4 | 75 | 100 | 80 | 14.6 | 0.32 | 0.40 | 0.25 | 0.50 | 1.0 | 0.68 | 0.0 | 24.0 | 15.0 |
sec | 2001_12 | dssp | 1h6w:A | 51.0 | 0 | 0 | 48 | 27 | 60 | 71 | 22.1 | 0 | 40 | 21 | 3.9 | 0.04 | 0.04 | 0.04 | -0.11 | 0.16 | 0.02 | 100.0 | 3.0 | 13.0 |
sec | 2001_12 | dssp | 1h7l:A | 74.4 | 74 | 86 | 66 | 83 | 81 | 61 | 80.2 | 88 | 71 | 81 | 2.2 | 0.38 | 0.38 | 0.39 | 0.69 | 0.66 | 0.53 | 100.0 | 5.0 | 6.0 |
sec | 2001_12 | dssp | 1h7q:A | 74.4 | 76 | 86 | 64 | 83 | 81 | 61 | 74.3 | 88 | 63 | 71 | 2.2 | 0.39 | 0.39 | 0.40 | 0.70 | 0.64 | 0.53 | 100.0 | 4.0 | 6.0 |
sec | 2001_12 | dssp | 1hn3:A | 47.5 | 0 | 0 | 0 | 0 | 100 | 79 | 45.9 | 0 | 100 | 96 | 40.0 | 0.56 | 0.56 | 0.57 | 1.0 | 1.0 | 0.77 | 100.0 | 52.0 | 40.0 |
sec | 2001_12 | dssp | 1hnn:A | 69.0 | 78 | 70 | 32 | 95 | 84 | 63 | 70.0 | 83 | 45 | 73 | 6.5 | 0.27 | 0.25 | 0.30 | 0.57 | 0.49 | 0.52 | 0.0 | 4.0 | 16.0 |
sec | 2001_12 | dssp | 1hnn:B | 66.3 | 66 | 70 | 39 | 67 | 84 | 63 | 66.0 | 64 | 54 | 75 | 10.1 | 0.21 | 0.20 | 0.22 | 0.49 | 0.40 | 0.54 | 0.0 | 1.0 | 10.0 |
sec | 2001_12 | dssp | 1hqk:A | 81.8 | 83 | 94 | 70 | 96 | 89 | 60 | 88.6 | 96 | 78 | 83 | 0.6 | 0.52 | 0.52 | 0.52 | 0.78 | 0.77 | 0.62 | 0.0 | 5.0 | 6.0 |
sec | 2001_12 | dssp | 1i35:A | 76.8 | 44 | 100 | 84 | 65 | 93 | 78 | 74.8 | 48 | 96 | 78 | 8.4 | 0.42 | 0.40 | 0.44 | 0.60 | 0.63 | 0.71 | 100.0 | 15.0 | 7.0 |
sec | 2001_12 | dssp | 1i3b:A | 71.2 | 0 | 0 | 62 | 72 | 79 | 70 | 70.6 | 100 | 68 | 72 | 0.0 | 0.13 | 0.13 | 0.14 | 1.0 | 0.42 | 0.42 | 0.0 | 0.00 | 6.0 |
sec | 2001_12 | dssp | 1i4s:A | 78.9 | 81 | 90 | 50 | 25 | 75 | 64 | 68.9 | 67 | 12 | 75 | 0.6 | 0.29 | 0.31 | 0.28 | 0.59 | 0.34 | 0.54 | 100.0 | 6.0 | 1.0 |
sec | 2001_12 | dssp | 1ik6:A | 78.8 | 93 | 82 | 44 | 100 | 88 | 66 | 83.3 | 100 | 55 | 83 | 6.0 | 0.46 | 0.44 | 0.49 | 0.76 | 0.60 | 0.66 | 100.0 | 6.0 | 15.0 |
sec | 2001_12 | dssp | 1ilw:A | 79.3 | 81 | 95 | 50 | 91 | 94 | 68 | 69.7 | 84 | 61 | 63 | 0.0 | 0.50 | 0.47 | 0.54 | 0.83 | 0.61 | 0.62 | 0.0 | 5.0 | 11.0 |
sec | 2001_12 | dssp | 1im5:A | 79.9 | 82 | 95 | 50 | 91 | 94 | 69 | 69.5 | 84 | 61 | 63 | 0.0 | 0.51 | 0.48 | 0.55 | 0.84 | 0.61 | 0.63 | 0.0 | 4.0 | 11.0 |
sec | 2001_12 | dssp | 1irq:A | 64.6 | 53 | 100 | 57 | 40 | 100 | 50 | 64.0 | 53 | 85 | 79 | 12.5 | 0.32 | 0.35 | 0.30 | 0.54 | 0.36 | 0.59 | 100.0 | 29.0 | 6.0 |
sec | 2001_12 | dssp | 1irq:B | 61.2 | 50 | 100 | 57 | 40 | 100 | 43 | 59.7 | 50 | 85 | 72 | 12.2 | 0.29 | 0.32 | 0.27 | 0.50 | 0.37 | 0.53 | 100.0 | 32.0 | 6.0 |
sec | 2001_12 | dssp | 1j4r:A | 81.3 | 25 | 100 | 83 | 89 | 92 | 75 | 79.2 | 33 | 95 | 76 | 0.0 | 0.46 | 0.41 | 0.52 | 0.47 | 0.78 | 0.64 | 100.0 | 8.0 | 2.0 |
sec | 2001_12 | dssp | 1j4x:A | 79.8 | 75 | 98 | 56 | 73 | 92 | 69 | 71.2 | 76 | 52 | 71 | 0.0 | 0.47 | 0.46 | 0.49 | 0.78 | 0.59 | 0.62 | 100.0 | 10.0 | 3.0 |
sec | 2001_12 | dssp | 1j83:A | 74.4 | 0 | 0 | 73 | 76 | 85 | 73 | 69.6 | 0 | 74 | 74 | 1.1 | 0.23 | 0.20 | 0.27 | 1.0 | 0.59 | 0.51 | 100.0 | 7.0 | 1.0 |
sec | 2001_12 | dssp | 1j8e:A | 65.9 | 0 | 0 | 16 | 100 | 100 | 65 | 35.9 | 0 | 16 | 52 | 0.0 | 0.24 | 0.05 | 0.43 | 1.0 | 0.38 | 0.20 | 100.0 | 22.0 | 11.0 |
sec | 2001_12 | dssp | 1jfj:A | 79.1 | 90 | 87 | 0 | 0 | 80 | 66 | 85.0 | 98 | 0 | 84 | 0.7 | 0.39 | 0.34 | 0.45 | 0.73 | 1.0 | 0.57 | 0.0 | 2.0 | 8.0 |
sec | 2001_12 | dssp | 1jfk:A | 79.1 | 93 | 85 | 0 | 0 | 75 | 68 | 78.2 | 89 | 0 | 79 | 0.7 | 0.40 | 0.34 | 0.47 | 0.74 | 1.0 | 0.56 | 0.0 | 5.0 | 8.0 |
sec | 2001_12 | dssp | 1jfz:A | 82.4 | 84 | 91 | 50 | 25 | 79 | 71 | 76.8 | 75 | 12 | 83 | 0.6 | 0.36 | 0.38 | 0.34 | 0.66 | 0.34 | 0.62 | 100.0 | 4.0 | 1.0 |
sec | 2001_12 | dssp | 1jfz:B | 81.2 | 84 | 89 | 50 | 25 | 76 | 70 | 72.6 | 71 | 12 | 78 | 1.3 | 0.30 | 0.32 | 0.29 | 0.61 | 0.34 | 0.60 | 100.0 | 4.0 | 1.0 |
sec | 2001_12 | dssp | 1jmv:A | 82.1 | 88 | 85 | 77 | 96 | 78 | 70 | 83.2 | 83 | 91 | 76 | 0.0 | 0.53 | 0.53 | 0.54 | 0.76 | 0.82 | 0.60 | 0.0 | 1.0 | 4.0 |
sec | 2001_12 | dssp | 1jmv:B | 85.5 | 93 | 88 | 76 | 92 | 86 | 79 | 84.0 | 100 | 76 | 78 | 0.0 | 0.59 | 0.59 | 0.60 | 0.87 | 0.78 | 0.70 | 100.0 | 1.0 | 5.0 |
sec | 2001_12 | dssp | 1joj:A | 77.2 | 0 | 0 | 67 | 89 | 91 | 69 | 73.0 | 0 | 68 | 83 | 0.4 | 0.28 | 0.26 | 0.30 | 1.0 | 0.60 | 0.58 | 0.0 | 2.0 | 12.0 |
sec | 2001_12 | dssp | 1jph:A | 75.6 | 70 | 94 | 71 | 51 | 83 | 67 | 75.4 | 74 | 79 | 75 | 2.2 | 0.35 | 0.37 | 0.35 | 0.68 | 0.55 | 0.56 | 100.0 | 13.0 | 3.0 |
sec | 2001_12 | dssp | 1jpi:A | 76.2 | 72 | 92 | 70 | 56 | 83 | 67 | 78.6 | 76 | 81 | 80 | 1.9 | 0.35 | 0.36 | 0.35 | 0.67 | 0.58 | 0.56 | 100.0 | 11.0 | 2.0 |
sec | 2001_12 | dssp | 1jpk:A | 75.9 | 70 | 93 | 70 | 57 | 84 | 66 | 77.6 | 74 | 83 | 79 | 1.9 | 0.35 | 0.36 | 0.35 | 0.67 | 0.59 | 0.56 | 100.0 | 12.0 | 2.0 |
sec | 2001_12 | dssp | 1jqz:A | 72.3 | 0 | 0 | 60 | 78 | 88 | 70 | 58.4 | 0 | 65 | 60 | 0.0 | 0.21 | 0.17 | 0.25 | 1.0 | 0.53 | 0.43 | 100.0 | 6.0 | 8.0 |
sec | 2001_12 | dssp | 1jt3:A | 69.9 | 0 | 0 | 58 | 75 | 85 | 67 | 60.0 | 0 | 65 | 62 | 0.0 | 0.17 | 0.15 | 0.21 | 1.0 | 0.48 | 0.39 | 100.0 | 6.0 | 8.0 |
sec | 2001_12 | dssp | 1jt4:A | 71.6 | 0 | 0 | 64 | 73 | 84 | 70 | 60.3 | 0 | 68 | 61 | 0.0 | 0.20 | 0.17 | 0.23 | 1.0 | 0.52 | 0.41 | 100.0 | 6.0 | 4.0 |
sec | 2001_12 | dssp | 1jt5:A | 71.8 | 0 | 0 | 64 | 72 | 85 | 71 | 61.3 | 0 | 68 | 63 | 0.7 | 0.17 | 0.15 | 0.21 | 1.0 | 0.50 | 0.43 | 100.0 | 6.0 | 4.0 |
sec | 2001_12 | dssp | 1jt7:A | 70.9 | 0 | 0 | 62 | 74 | 85 | 69 | 60.7 | 0 | 69 | 61 | 0.7 | 0.17 | 0.15 | 0.20 | 1.0 | 0.50 | 0.43 | 100.0 | 6.0 | 6.0 |
sec | 2001_12 | dssp | 1jtc:A | 75.2 | 0 | 0 | 69 | 78 | 87 | 73 | 65.0 | 0 | 74 | 65 | 0.0 | 0.26 | 0.22 | 0.30 | 1.0 | 0.60 | 0.49 | 100.0 | 6.0 | 4.0 |
sec | 2001_12 | dssp | 1jwn:A | 77.2 | 77 | 94 | 0 | 0 | 78 | 39 | 69.3 | 70 | 100 | 58 | 0.0 | 0.17 | 0.20 | 0.14 | 0.43 | 1.0 | 0.43 | 100.0 | 15.0 | 0.00 |
sec | 2001_12 | dssp | 1jxg:A | 76.0 | 0 | 0 | 83 | 77 | 83 | 75 | 67.8 | 0 | 89 | 64 | 0.0 | 0.34 | 0.29 | 0.39 | 1.0 | 0.68 | 0.51 | 100.0 | 9.0 | 3.0 |
sec | 2001_12 | dssp | 1jzk:A | 77.2 | 77 | 94 | 0 | 0 | 75 | 40 | 69.8 | 70 | 100 | 62 | 0.0 | 0.16 | 0.18 | 0.13 | 0.42 | 1.0 | 0.42 | 100.0 | 14.0 | 0.00 |
sec | 2001_12 | dssp | 1jzl:A | 78.6 | 77 | 94 | 0 | 0 | 81 | 45 | 79.6 | 82 | 100 | 66 | 0.0 | 0.21 | 0.24 | 0.18 | 0.49 | 1.0 | 0.49 | 100.0 | 14.0 | 0.00 |
sec | 2001_12 | dssp | 1jzm:A | 75.2 | 75 | 92 | 0 | 0 | 72 | 38 | 67.3 | 67 | 100 | 64 | 0.0 | 0.13 | 0.15 | 0.11 | 0.38 | 1.0 | 0.38 | 100.0 | 15.0 | 0.00 |
sec | 2001_12 | dssp | 1k0v:A | 78.1 | 86 | 90 | 73 | 61 | 75 | 79 | 82.2 | 100 | 65 | 78 | 0.0 | 0.45 | 0.46 | 0.45 | 0.83 | 0.57 | 0.56 | 100.0 | 1.0 | 4.0 |
sec | 2001_12 | dssp | 1k3c:A | 72.0 | 61 | 92 | 52 | 74 | 90 | 64 | 58.7 | 66 | 57 | 54 | 1.6 | 0.33 | 0.31 | 0.36 | 0.67 | 0.53 | 0.52 | 0.0 | 11.0 | 7.0 |
sec | 2001_12 | dssp | 1k3d:A | 71.6 | 60 | 91 | 53 | 74 | 89 | 64 | 58.7 | 65 | 58 | 54 | 1.6 | 0.32 | 0.30 | 0.35 | 0.65 | 0.53 | 0.51 | 0.0 | 10.0 | 6.0 |
sec | 2001_12 | dssp | 1k6u:A | 82.8 | 58 | 100 | 66 | 100 | 100 | 75 | 82.8 | 66 | 93 | 84 | 0.0 | 0.55 | 0.49 | 0.62 | 0.72 | 0.77 | 0.68 | 100.0 | 8.0 | 8.0 |
sec | 2001_12 | dssp | 1k7b:A | 73.8 | 0 | 0 | 25 | 33 | 93 | 76 | 48.6 | 0 | 25 | 60 | 0.0 | 0.06 | 0.04 | 0.10 | 1.0 | 0.22 | 0.06 | 100.0 | 14.0 | 2.0 |
sec | 2001_12 | dssp | 1k8d:A | 72.6 | 77 | 85 | 56 | 89 | 87 | 59 | 61.5 | 44 | 71 | 67 | 1.4 | 0.37 | 0.37 | 0.39 | 0.75 | 0.58 | 0.51 | 100.0 | 2.0 | 14.0 |
sec | 2001_12 | dssp | 1k8d:B | 77.8 | 0 | 0 | 73 | 80 | 82 | 75 | 81.3 | 100 | 83 | 78 | 0.0 | 0.23 | 0.24 | 0.24 | 1.0 | 0.55 | 0.55 | 0.0 | 0.00 | 4.0 |
sec | 2001_12 | dssp | 1k8k:C | 83.0 | 0 | 0 | 77 | 91 | 91 | 76 | 89.1 | 0 | 91 | 87 | 0.0 | 0.37 | 0.36 | 0.39 | 1.0 | 0.69 | 0.67 | 0.0 | 1.0 | 8.0 |
sec | 2001_12 | dssp | 1k8k:E | 82.1 | 87 | 91 | 0 | 0 | 87 | 78 | 69.8 | 94 | 0 | 57 | 0.0 | 0.46 | 0.45 | 0.49 | 0.81 | -0.04 | 0.64 | 100.0 | 2.0 | 2.0 |
sec | 2001_12 | dssp | 1k8k:F | 77.7 | 85 | 82 | 80 | 70 | 65 | 74 | 62.2 | 61 | 92 | 52 | 2.4 | 0.37 | 0.38 | 0.37 | 0.67 | 0.70 | 0.55 | 100.0 | 1.0 | 2.0 |
sec | 2001_12 | dssp | 1k8k:G | 76.7 | 36 | 100 | 0 | 0 | 100 | 73 | 57.3 | 36 | 100 | 69 | 0.0 | 0.30 | 0.23 | 0.39 | 0.51 | 1.0 | 0.51 | 100.0 | 23.0 | 0.00 |
sec | 2001_12 | dssp | 1k92:A | 79.7 | 85 | 87 | 52 | 81 | 86 | 72 | 76.4 | 86 | 63 | 72 | 1.8 | 0.43 | 0.42 | 0.45 | 0.77 | 0.59 | 0.63 | 100.0 | 0.00 | 6.0 |
sec | 2001_12 | dssp | 1kcz:A | 74.3 | 77 | 84 | 50 | 66 | 82 | 67 | 74.0 | 83 | 54 | 72 | 3.8 | 0.30 | 0.30 | 0.32 | 0.67 | 0.50 | 0.56 | 100.0 | 4.0 | 4.0 |
sec | 2001_12 | dssp | 1kd0:A | 67.6 | 59 | 88 | 58 | 50 | 81 | 62 | 69.0 | 63 | 67 | 76 | 6.7 | 0.24 | 0.25 | 0.24 | 0.57 | 0.43 | 0.49 | 100.0 | 14.0 | 2.0 |
sec | 2001_12 | dssp | 1kf2:A | 69.4 | 61 | 94 | 45 | 74 | 92 | 62 | 63.8 | 65 | 56 | 69 | 3.2 | 0.32 | 0.30 | 0.35 | 0.71 | 0.42 | 0.51 | 100.0 | 7.0 | 13.0 |
sec | 2001_12 | dssp | 1kf3:A | 69.4 | 61 | 94 | 45 | 74 | 92 | 62 | 63.8 | 65 | 56 | 69 | 3.2 | 0.32 | 0.30 | 0.35 | 0.71 | 0.42 | 0.51 | 100.0 | 7.0 | 13.0 |
sec | 2001_12 | dssp | 1kf4:A | 70.2 | 61 | 94 | 45 | 74 | 94 | 63 | 64.6 | 65 | 57 | 69 | 4.0 | 0.35 | 0.32 | 0.38 | 0.71 | 0.42 | 0.54 | 100.0 | 7.0 | 13.0 |
sec | 2001_12 | dssp | 1kf5:A | 69.4 | 61 | 94 | 45 | 74 | 92 | 62 | 63.8 | 65 | 56 | 69 | 3.2 | 0.32 | 0.30 | 0.35 | 0.71 | 0.42 | 0.51 | 100.0 | 7.0 | 13.0 |
sec | 2001_12 | dssp | 1kf7:A | 69.4 | 61 | 94 | 45 | 74 | 92 | 62 | 63.8 | 65 | 56 | 69 | 3.2 | 0.32 | 0.30 | 0.35 | 0.71 | 0.42 | 0.51 | 100.0 | 7.0 | 13.0 |
sec | 2001_12 | dssp | 1kf8:A | 69.4 | 61 | 94 | 45 | 74 | 92 | 62 | 63.8 | 65 | 56 | 69 | 3.2 | 0.32 | 0.30 | 0.35 | 0.71 | 0.42 | 0.51 | 100.0 | 7.0 | 13.0 |
sec | 2001_12 | dssp | 1kgd:A | 82.9 | 92 | 88 | 69 | 90 | 80 | 73 | 84.8 | 100 | 76 | 73 | 0.0 | 0.54 | 0.54 | 0.55 | 0.83 | 0.73 | 0.63 | 0.0 | 2.0 | 5.0 |
sec | 2001_12 | dssp | 1kkd:A | 27.2 | 100 | 5 | 0 | 0 | 23 | 100 | 13.2 | 21 | 100 | 13 | 0.0 | 0.04 | 0.06 | 0.02 | 0.11 | 1.0 | 0.11 | 0.0 | 72.0 | 0.00 |
sec | 2001_12 | dssp | THIS_month:psum | 73.7 | 56 | 69 | 48 | 61 | 84 | 66 | 68.8 | 60.3 | 63.8 | 69.4 | 2.5 | 0.33 | 0.31 | 0.35 | 0.71 | 0.60 | 0.52 | 74.3 | 9.4 | 6.5 |
sec | 2001_12 | dssp | ALL_proteins:psum | 73.8 | 71 | 85 | 59 | 74 | 84 | 67 | 69.2 | 65.7 | 66.3 | 68.3 | 2.5 | 0.34 | 0.33 | 0.35 | 0.67 | 0.58 | 0.54 | 7980.3 | 8.3 | 6.8 |
sec | 2001_12 | dssp | ALL_proteins:sig | 9.6 | 31 | 35 | 30 | 36 | 11 | 12 | 15.0 | 29.3 | 26.4 | 14.8 | 4.0 | 0.13 | 0.14 | 0.14 | 0.23 | 0.25 | 0.16 | 7903.8 | 8.2 | 7.2 |
sec | 2001_12 | dssp | ALL_proteins:errsig | 0.27 | 0.91 | 1 | 0.86 | 1 | 0.32 | 0.35 | 0.43 | 0.84 | 0.75 | 0.42 | 0.11 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 226.4 | 0.23 | 0.20 |
psum | percentage over all proteins |
sig | standard deviation |
errsig | significant difference (to distinguish between two methods) |
type | prediction type |
date | date when added [yyyy_mm_dd] |
sots | standard of truth |
id | identifier of protein |
Q3 | three-state per-residue accuracy (percentage of correctly predicted residues) |
Q3H%o | correctly predicted helix residues (percentage of helix observed) |
Q3H%p | correctly predicted helix residues (percentage of helix predicted) |
Q3E%o | correctly predicted strand residues (percentage of helix observed) |
Q3E%p | correctly predicted strand residues (percentage of helix predicted) |
Q3L%o | correctly predicted loop residues (percentage of helix observed) |
Q3L%p | correctly predicted loop residues (percentage of helix predicted) |
sov | per segment accuracy (three states) |
sovH | per segment accuracy for helix residues |
sovE | per segment accuracy for strand residues |
sovL | per segment accuracy for non-regular residues |
BAD | percentage of confused HELIX/STRAND residues (helix predicted as strand, strand predicted as helix) |
infoO | information index accuracy (percentage of observed) |
infoP | information index accuracy (percentage of predicted) |
corrH | Matthews correlation index for helix |
corrE | Matthews correlation index for strand |
corrL | Matthews correlation index for loop |
var | variance over all proteins (1/N-1)*( score(i) - |
sig | sigma (standard deviation) over all proteins (sqrt[var]) |
errsig | significant differences ( standard dev / sqrt(Nprot) ) |