EVA summary for category sec (2)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	444	92	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	362	77	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
PHD	373	78	method/phd.html
PHDpsi	370	78	method/phdpsi.html
PROF_king	371	85	method/prof_king.html
PROFsec	373	78	method/profsec.html
Prospect	282	73	method/prospect.html
PSIpred	370	85	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	83	22	method/sable.html
SABLE2	26	5	method/sable2.html
SAM-T99sec	325	85	method/samt99_sec.html
SCRATCH (SSpro3)	162	40	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	15	5	method/sspro4.html
yaspin	36	9	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 70 proteins and 5 methods (HTML - ASCII)
- set 6: 71 proteins and 4 methods (HTML - ASCII)
Detail level 2 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	4.5	+/-10.0	0.10	+/-10.00	1.00	+/-10.00	0.40	+/-10.00	0.22	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	70	dssp	1	PSIpred	77.5	+/-1.4	76.3	+/-2.1	2.7	+/-0.6	0.37	+/-0.02	0.69	+/-0.03	0.69	+/-0.04	0.56	+/-0.02	87.1	+/-4.0
				SAM-T99sec	77.2	+/-1.3	74.7	+/-1.7	3.8	+/-0.8	0.38	+/-0.02	0.68	+/-0.03	0.70	+/-0.04	0.58	+/-0.02	87.1	+/-4.0
common 5	70	dssp	2	PROFsec	75.6	+/-1.6	75.3	+/-2.0	4.6	+/-0.9	0.38	+/-0.02	0.67	+/-0.03	0.70	+/-0.04	0.57	+/-0.02	82.9	+/-4.5
common 5	70	dssp	3	PHD	72.7	+/-1.5	69.7	+/-2.1	5.9	+/-1.2	0.34	+/-0.02	0.64	+/-0.03	0.68	+/-0.04	0.52	+/-0.03	84.3	+/-4.4
				PHDpsi	73.0	+/-1.5	69.9	+/-2.2	5.7	+/-1.2	0.34	+/-0.02	0.65	+/-0.03	0.68	+/-0.04	0.53	+/-0.03	84.3	+/-4.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	71	dssp	1	PSIpred	77.5	+/-1.4	76.6	+/-2.0	2.7	+/-0.6	0.37	+/-0.02	0.70	+/-0.03	0.69	+/-0.04	0.56	+/-0.02	87.3	+/-4.0
common 6	71	dssp	2	PROFsec	75.7	+/-1.5	75.4	+/-1.9	4.6	+/-0.9	0.37	+/-0.02	0.67	+/-0.03	0.70	+/-0.04	0.57	+/-0.02	83.1	+/-4.5
common 6	71	dssp	3	PHD	72.8	+/-1.5	69.9	+/-2.1	5.8	+/-1.2	0.34	+/-0.02	0.65	+/-0.03	0.68	+/-0.04	0.53	+/-0.03	83.1	+/-4.5
				PHDpsi	73.2	+/-1.5	70.2	+/-2.1	5.7	+/-1.2	0.34	+/-0.02	0.65	+/-0.03	0.68	+/-0.04	0.53	+/-0.03	83.1	+/-4.5