EVA summary for category sec (2)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	418	87	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	336	72	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	114	34	method/jufo.html
PHD	347	73	method/phd.html
PHDpsi	344	73	method/phdpsi.html
PROF_king	346	80	method/prof_king.html
PROFsec	347	73	method/profsec.html
Prospect	262	69	method/prospect.html
PSIpred	344	80	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	57	17	method/sable.html
SABLE2	0	0	method/sable2.html
SAM-T99sec	299	80	method/samt99_sec.html
SCRATCH (SSpro3)	136	35	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
	6	3	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 44 proteins and 5 methods (HTML - ASCII)
- set 6: 45 proteins and 4 methods (HTML - ASCII)
Detail level 2 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	4.5	+/-10.0	0.10	+/-10.00	1.00	+/-10.00	0.40	+/-10.00	0.22	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	44	dssp	1	SAM-T99sec	77.5	+/-1.4	74.4	+/-1.9	2.9	+/-0.9	0.38	+/-0.02	0.69	+/-0.04	0.65	+/-0.04	0.57	+/-0.03	84.1	+/-5.6
common 5	44	dssp	2	PROFsec	74.6	+/-1.7	73.6	+/-2.3	4.2	+/-1.0	0.34	+/-0.03	0.67	+/-0.04	0.65	+/-0.05	0.53	+/-0.03	79.5	+/-6.2
				PSIpred	75.7	+/-1.6	72.2	+/-2.3	3.3	+/-1.0	0.34	+/-0.03	0.69	+/-0.04	0.65	+/-0.05	0.53	+/-0.03	81.8	+/-5.9
common 5	44	dssp	3	PHD	72.3	+/-1.4	69.6	+/-2.2	5.1	+/-1.2	0.31	+/-0.03	0.64	+/-0.04	0.61	+/-0.05	0.49	+/-0.03	79.5	+/-6.2
				PHDpsi	72.9	+/-1.4	70.0	+/-2.2	4.8	+/-1.2	0.32	+/-0.03	0.65	+/-0.04	0.61	+/-0.05	0.50	+/-0.03	79.5	+/-6.2

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	45	dssp	1	PHD	72.6	+/-1.4	70.1	+/-2.2	5.0	+/-1.2	0.31	+/-0.03	0.65	+/-0.04	0.61	+/-0.05	0.50	+/-0.03	77.8	+/-6.3
				PHDpsi	73.1	+/-1.4	70.4	+/-2.2	4.7	+/-1.2	0.32	+/-0.02	0.65	+/-0.04	0.61	+/-0.05	0.50	+/-0.03	77.8	+/-6.3
				PROFsec	74.7	+/-1.6	73.7	+/-2.3	4.1	+/-0.9	0.34	+/-0.02	0.67	+/-0.04	0.65	+/-0.05	0.53	+/-0.03	80.0	+/-6.0
				PSIpred	75.8	+/-1.6	72.7	+/-2.3	3.2	+/-1.0	0.33	+/-0.03	0.69	+/-0.04	0.65	+/-0.05	0.53	+/-0.03	82.2	+/-5.8