Home - Secondary structure Comparative modelling Contacts Threading - search - FTP - Mirrors - Bottom

EVA summary for category sec (3)

Contents

Local link to information about methods evaluated
All prediction results for secondary structure

Common subset 1
Common subset 2
Common subset 3
Common subset 4

All prediction results in ASCII (raw text)
Explanations of measures for prediction accuracy
For older versions of the results

About secondary structure prediction methods evaluated

Method	Nprot	Nweek	Detailed results for method
ALL	346	67	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	282	58	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	53	15	method/jufo.html
PHD	278	54	method/phd.html
PHDpsi	276	54	method/phdpsi.html
PROF_king	282	62	method/prof_king.html
PROFsec	278	54	method/profsec.html
Prospect	214	52	method/prospect.html
PSIpred	291	63	method/psipred.html
SAM-T99sec	230	62	method/samt99_sec.html
SCRATCH (SSpro3)	75	17	method/scratch.html
SSpro2	257	48	method/sspro2.html

Comparison of secondary structure prediction methods (detail level 3)

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 31 proteins and 10 methods (HTML - ASCII)
- set 2: 55 proteins and 8 methods (HTML - ASCII)
- set 3: 55 proteins and 7 methods (HTML - ASCII)
- set 4: 80 proteins and 6 methods (HTML - ASCII)
- set 5: 156 proteins and 5 methods (HTML - ASCII)
- set 6: 242 proteins and 4 methods (HTML - ASCII)
Detail level 3 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	Q3H%o	ERRsigQ3H%o	Q3H%p	ERRsigQ3H%p	Q3E%o	ERRsigQ3E%o	Q3E%p	ERRsigQ3E%p	Q3L%o	ERRsigQ3L%o	Q3L%p	ERRsigQ3L%p	sov	ERRsigsov	sovH	ERRsigsovH	sovE	ERRsigsovE	sovL	ERRsigsovL	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass	contDH	ERRsigcontDH	contDE	ERRsigcontDE
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	31	dssp	1	APSSP2	76.7	+/-1.5	79.6	+/-5.4	78.5	+/-5.6	61.1	+/-6.0	74.3	+/-7.2	78.8	+/-2.6	70.7	+/-2.4	71.4	+/-2.8	75.0	+/-4.2	79.8	+/-3.7	71.2	+/-2.9	2.2	+/-0.5	0.39	+/-0.03	0.67	+/-0.04	0.59	+/-0.05	0.55	+/-0.03	90.3	+/-5.4	6.2	+/-1.1	6.0	+/-1.1
				JPred	73.3	+/-1.7	70.6	+/-5.9	81.3	+/-6.3	55.9	+/-5.4	73.1	+/-7.2	80.9	+/-2.9	64.1	+/-2.5	70.3	+/-2.9	70.8	+/-5.0	77.5	+/-3.8	68.8	+/-3.0	1.7	+/-0.5	0.33	+/-0.03	0.64	+/-0.04	0.56	+/-0.05	0.51	+/-0.03	77.4	+/-7.6	7.4	+/-1.7	7.4	+/-1.4
				PHDpsi	75.1	+/-1.9	76.5	+/-6.2	78.7	+/-6.1	62.1	+/-6.4	68.9	+/-6.8	76.4	+/-2.8	69.5	+/-2.8	69.7	+/-2.9	71.9	+/-4.9	76.9	+/-4.6	66.6	+/-2.9	1.6	+/-0.4	0.36	+/-0.03	0.66	+/-0.04	0.56	+/-0.05	0.50	+/-0.03	93.5	+/-4.5	7.0	+/-1.0	6.5	+/-1.6
				PROF_king	73.6	+/-1.9	71.2	+/-6.4	83.5	+/-7.1	68.3	+/-6.8	63.6	+/-6.5	76.6	+/-2.8	68.0	+/-2.5	69.8	+/-3.3	67.9	+/-5.6	77.9	+/-4.7	68.8	+/-3.2	3.4	+/-1.0	0.33	+/-0.03	0.66	+/-0.05	0.56	+/-0.05	0.51	+/-0.03	80.6	+/-7.2	8.5	+/-1.5	6.2	+/-1.4
				PROFsec	77.4	+/-1.6	77.8	+/-6.3	81.6	+/-6.5	70.5	+/-6.7	69.5	+/-6.8	75.7	+/-2.6	72.5	+/-2.4	74.8	+/-2.7	75.0	+/-5.0	82.3	+/-3.6	69.9	+/-2.9	1.8	+/-0.4	0.39	+/-0.03	0.69	+/-0.04	0.61	+/-0.04	0.54	+/-0.03	90.3	+/-5.4	6.3	+/-1.2	3.7	+/-0.8
				Prospect	73.6	+/-1.6	76.0	+/-5.7	76.3	+/-6.1	57.6	+/-5.8	70.7	+/-7.1	77.5	+/-2.8	65.9	+/-2.4	69.8	+/-2.9	74.3	+/-4.8	76.2	+/-4.3	67.1	+/-2.7	2.4	+/-0.5	0.33	+/-0.03	0.63	+/-0.05	0.55	+/-0.05	0.50	+/-0.03	80.6	+/-7.2	6.2	+/-0.9	7.6	+/-1.4
				PSIpred	77.8	+/-1.9	82.0	+/-5.7	79.2	+/-5.7	65.5	+/-6.3	73.4	+/-7.2	78.3	+/-2.7	72.7	+/-2.5	73.6	+/-2.7	78.2	+/-4.0	79.3	+/-3.8	69.8	+/-3.1	2.1	+/-0.6	0.41	+/-0.03	0.69	+/-0.04	0.62	+/-0.05	0.56	+/-0.03	87.1	+/-6.1	5.1	+/-1.2	5.6	+/-1.1
				SAM-T99sec	76.7	+/-1.7	83.6	+/-5.4	76.8	+/-5.4	63.3	+/-6.1	75.0	+/-7.2	75.2	+/-3.3	71.6	+/-2.3	71.1	+/-2.9	76.9	+/-3.7	78.4	+/-4.0	68.4	+/-3.3	1.7	+/-0.5	0.39	+/-0.03	0.69	+/-0.04	0.61	+/-0.05	0.54	+/-0.03	87.1	+/-6.1	5.7	+/-1.3	6.0	+/-1.2
				SSpro2	75.7	+/-1.6	81.0	+/-6.2	78.4	+/-5.8	61.5	+/-6.1	72.3	+/-7.1	77.6	+/-2.7	69.8	+/-2.4	69.1	+/-2.2	72.1	+/-4.6	76.6	+/-4.2	69.5	+/-2.7	2.4	+/-0.4	0.37	+/-0.03	0.68	+/-0.04	0.58	+/-0.05	0.54	+/-0.03	74.2	+/-8.0	6.5	+/-1.1	6.5	+/-1.4
common 1	31	dssp	2	PHD	70.4	+/-2.4	74.8	+/-7.2	76.8	+/-6.6	60.6	+/-6.4	66.1	+/-6.7	72.6	+/-3.1	67.1	+/-3.0	64.5	+/-3.1	64.8	+/-5.6	73.7	+/-4.5	62.4	+/-3.1	4.2	+/-1.4	0.31	+/-0.03	0.63	+/-0.06	0.53	+/-0.06	0.48	+/-0.03	83.9	+/-6.7	9.6	+/-1.6	9.2	+/-1.9

subset	nprot	sots	rank	method	Q3	ERRsigQ3	Q3H%o	ERRsigQ3H%o	Q3H%p	ERRsigQ3H%p	Q3E%o	ERRsigQ3E%o	Q3E%p	ERRsigQ3E%p	Q3L%o	ERRsigQ3L%o	Q3L%p	ERRsigQ3L%p	sov	ERRsigsov	sovH	ERRsigsovH	sovE	ERRsigsovE	sovL	ERRsigsovL	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass	contDH	ERRsigcontDH	contDE	ERRsigcontDE
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	55	dssp	1	JPred	72.0	+/-1.5	70.6	+/-5.1	81.3	+/-5.7	55.9	+/-4.6	73.1	+/-5.8	81.5	+/-2.0	65.7	+/-2.0	66.7	+/-2.7	62.8	+/-4.6	74.7	+/-3.5	65.4	+/-2.6	1.6	+/-0.3	0.31	+/-0.02	0.64	+/-0.04	0.56	+/-0.04	0.51	+/-0.03	81.8	+/-5.2	8.1	+/-1.5	7.1	+/-1.0
				PHDpsi	73.9	+/-1.4	76.5	+/-4.9	78.7	+/-4.9	62.1	+/-5.0	68.9	+/-5.3	73.1	+/-2.4	70.9	+/-2.0	66.9	+/-2.4	65.8	+/-4.1	76.8	+/-3.5	63.2	+/-2.6	1.7	+/-0.4	0.32	+/-0.02	0.66	+/-0.04	0.56	+/-0.04	0.50	+/-0.03	90.9	+/-3.9	7.2	+/-0.8	5.8	+/-1.0
				PROF_king	72.8	+/-1.4	71.2	+/-5.1	83.5	+/-5.7	68.3	+/-5.4	63.6	+/-5.1	75.1	+/-2.1	69.1	+/-1.8	66.5	+/-2.6	61.0	+/-4.5	78.5	+/-3.5	65.3	+/-2.6	2.8	+/-0.6	0.31	+/-0.02	0.66	+/-0.04	0.56	+/-0.04	0.51	+/-0.03	83.6	+/-5.0	7.9	+/-1.0	7.1	+/-1.1
				PROFsec	76.4	+/-1.3	77.8	+/-5.2	81.6	+/-5.3	70.5	+/-5.3	69.5	+/-5.3	74.0	+/-2.2	73.9	+/-1.8	71.5	+/-2.4	68.1	+/-4.4	82.7	+/-2.8	66.9	+/-2.7	1.6	+/-0.3	0.36	+/-0.03	0.69	+/-0.04	0.61	+/-0.04	0.54	+/-0.03	90.9	+/-3.9	6.8	+/-0.9	4.2	+/-0.7
				PSIpred	75.8	+/-1.6	82.0	+/-4.6	79.2	+/-4.5	65.5	+/-5.3	73.4	+/-5.7	76.9	+/-2.0	73.0	+/-2.0	69.8	+/-2.5	73.3	+/-3.5	77.5	+/-3.6	65.7	+/-2.8	2.1	+/-0.4	0.38	+/-0.03	0.69	+/-0.04	0.62	+/-0.04	0.56	+/-0.03	85.5	+/-4.8	6.2	+/-1.0	5.8	+/-0.8
				SAM-T99sec	74.6	+/-1.5	83.6	+/-4.7	76.8	+/-4.3	63.3	+/-4.9	75.0	+/-5.6	72.3	+/-2.7	72.0	+/-1.9	67.1	+/-2.5	70.0	+/-3.6	77.2	+/-3.3	63.8	+/-2.7	1.7	+/-0.3	0.35	+/-0.03	0.69	+/-0.04	0.61	+/-0.04	0.54	+/-0.03	87.3	+/-4.5	6.6	+/-1.0	5.7	+/-0.8
				SSpro2	74.6	+/-1.4	81.0	+/-4.9	78.4	+/-4.6	61.5	+/-4.9	72.3	+/-5.5	75.7	+/-2.1	71.5	+/-1.9	67.4	+/-2.3	67.7	+/-4.1	77.4	+/-3.4	66.1	+/-2.5	2.5	+/-0.3	0.35	+/-0.03	0.68	+/-0.04	0.58	+/-0.04	0.54	+/-0.03	78.2	+/-5.6	6.6	+/-0.8	6.3	+/-0.9
common 2	55	dssp	2	PHD	70.1	+/-1.6	74.8	+/-5.6	76.8	+/-5.3	60.6	+/-4.9	66.1	+/-5.1	69.9	+/-2.6	69.0	+/-2.1	62.6	+/-2.3	59.1	+/-4.5	74.8	+/-3.4	59.6	+/-2.5	3.9	+/-0.8	0.27	+/-0.02	0.63	+/-0.04	0.53	+/-0.04	0.48	+/-0.02	81.8	+/-5.2	9.5	+/-1.1	8.2	+/-1.3

subset	nprot	sots	rank	method	Q3	ERRsigQ3	Q3H%o	ERRsigQ3H%o	Q3H%p	ERRsigQ3H%p	Q3E%o	ERRsigQ3E%o	Q3E%p	ERRsigQ3E%p	Q3L%o	ERRsigQ3L%o	Q3L%p	ERRsigQ3L%p	sov	ERRsigsov	sovH	ERRsigsovH	sovE	ERRsigsovE	sovL	ERRsigsovL	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass	contDH	ERRsigcontDH	contDE	ERRsigcontDE
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	55	dssp	1	JPred	72.0	+/-1.5	70.6	+/-5.1	81.3	+/-5.7	55.9	+/-4.6	73.1	+/-5.8	81.5	+/-2.0	65.7	+/-2.0	66.7	+/-2.7	62.8	+/-4.6	74.7	+/-3.5	65.4	+/-2.6	1.6	+/-0.3	0.31	+/-0.02	0.64	+/-0.04	0.56	+/-0.04	0.51	+/-0.03	81.8	+/-5.2	8.1	+/-1.5	7.1	+/-1.0
				PHDpsi	73.9	+/-1.4	76.5	+/-4.9	78.7	+/-4.9	62.1	+/-5.0	68.9	+/-5.3	73.1	+/-2.4	70.9	+/-2.0	66.9	+/-2.4	65.8	+/-4.1	76.8	+/-3.5	63.2	+/-2.6	1.7	+/-0.4	0.32	+/-0.02	0.66	+/-0.04	0.56	+/-0.04	0.50	+/-0.03	90.9	+/-3.9	7.2	+/-0.8	5.8	+/-1.0
				PROF_king	72.8	+/-1.4	71.2	+/-5.1	83.5	+/-5.7	68.3	+/-5.4	63.6	+/-5.1	75.1	+/-2.1	69.1	+/-1.8	66.5	+/-2.6	61.0	+/-4.5	78.5	+/-3.5	65.3	+/-2.6	2.8	+/-0.6	0.31	+/-0.02	0.66	+/-0.04	0.56	+/-0.04	0.51	+/-0.03	83.6	+/-5.0	7.9	+/-1.0	7.1	+/-1.1
				PROFsec	76.4	+/-1.3	77.8	+/-5.2	81.6	+/-5.3	70.5	+/-5.3	69.5	+/-5.3	74.0	+/-2.2	73.9	+/-1.8	71.5	+/-2.4	68.1	+/-4.4	82.7	+/-2.8	66.9	+/-2.7	1.6	+/-0.3	0.36	+/-0.03	0.69	+/-0.04	0.61	+/-0.04	0.54	+/-0.03	90.9	+/-3.9	6.8	+/-0.9	4.2	+/-0.7
				PSIpred	75.8	+/-1.6	82.0	+/-4.6	79.2	+/-4.5	65.5	+/-5.3	73.4	+/-5.7	76.9	+/-2.0	73.0	+/-2.0	69.8	+/-2.5	73.3	+/-3.5	77.5	+/-3.6	65.7	+/-2.8	2.1	+/-0.4	0.38	+/-0.03	0.69	+/-0.04	0.62	+/-0.04	0.56	+/-0.03	85.5	+/-4.8	6.2	+/-1.0	5.8	+/-0.8
				SAM-T99sec	74.6	+/-1.5	83.6	+/-4.7	76.8	+/-4.3	63.3	+/-4.9	75.0	+/-5.6	72.3	+/-2.7	72.0	+/-1.9	67.1	+/-2.5	70.0	+/-3.6	77.2	+/-3.3	63.8	+/-2.7	1.7	+/-0.3	0.35	+/-0.03	0.69	+/-0.04	0.61	+/-0.04	0.54	+/-0.03	87.3	+/-4.5	6.6	+/-1.0	5.7	+/-0.8
common 3	55	dssp	2	PHD	70.1	+/-1.6	74.8	+/-5.6	76.8	+/-5.3	60.6	+/-4.9	66.1	+/-5.1	69.9	+/-2.6	69.0	+/-2.1	62.6	+/-2.3	59.1	+/-4.5	74.8	+/-3.4	59.6	+/-2.5	3.9	+/-0.8	0.27	+/-0.02	0.63	+/-0.04	0.53	+/-0.04	0.48	+/-0.02	81.8	+/-5.2	9.5	+/-1.1	8.2	+/-1.3

subset	nprot	sots	rank	method	Q3	ERRsigQ3	Q3H%o	ERRsigQ3H%o	Q3H%p	ERRsigQ3H%p	Q3E%o	ERRsigQ3E%o	Q3E%p	ERRsigQ3E%p	Q3L%o	ERRsigQ3L%o	Q3L%p	ERRsigQ3L%p	sov	ERRsigsov	sovH	ERRsigsovH	sovE	ERRsigsovE	sovL	ERRsigsovL	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass	contDH	ERRsigcontDH	contDE	ERRsigcontDE
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	80	dssp	1	JPred	72.5	+/-1.2	70.6	+/-4.2	81.3	+/-4.7	55.9	+/-3.6	73.1	+/-4.6	82.3	+/-1.6	66.3	+/-1.6	67.5	+/-2.0	62.2	+/-3.8	73.3	+/-2.8	67.5	+/-2.0	2.3	+/-0.4	0.32	+/-0.02	0.64	+/-0.03	0.56	+/-0.03	0.51	+/-0.02	82.5	+/-4.3	8.6	+/-1.2	7.3	+/-0.8
				PHDpsi	73.8	+/-1.2	76.5	+/-4.2	78.7	+/-4.3	62.1	+/-4.0	68.9	+/-4.2	73.9	+/-2.0	71.6	+/-1.6	67.7	+/-1.9	64.5	+/-3.7	75.9	+/-2.8	64.0	+/-2.0	2.3	+/-0.5	0.33	+/-0.02	0.66	+/-0.03	0.56	+/-0.03	0.50	+/-0.02	86.2	+/-3.9	7.7	+/-0.8	6.8	+/-0.9
				PROFsec	76.1	+/-1.2	77.8	+/-4.4	81.6	+/-4.4	70.5	+/-4.3	69.5	+/-4.2	74.2	+/-1.8	73.8	+/-1.5	71.7	+/-1.9	67.5	+/-3.9	81.6	+/-2.4	66.2	+/-2.1	2.1	+/-0.5	0.37	+/-0.02	0.69	+/-0.03	0.61	+/-0.03	0.54	+/-0.02	90.0	+/-3.4	6.9	+/-0.8	5.7	+/-0.8
				PSIpred	75.6	+/-1.4	82.0	+/-3.8	79.2	+/-3.8	65.5	+/-4.2	73.4	+/-4.6	75.9	+/-1.7	73.4	+/-1.6	71.1	+/-2.0	73.2	+/-3.2	77.2	+/-2.8	67.3	+/-2.1	2.5	+/-0.4	0.37	+/-0.02	0.69	+/-0.03	0.62	+/-0.03	0.56	+/-0.02	83.8	+/-4.2	6.6	+/-0.9	5.6	+/-0.7
				SAM-T99sec	74.9	+/-1.2	83.6	+/-3.9	76.8	+/-3.6	63.3	+/-4.0	75.0	+/-4.5	72.0	+/-2.2	71.5	+/-1.8	68.9	+/-2.0	70.2	+/-3.3	76.6	+/-2.7	63.6	+/-2.3	2.1	+/-0.4	0.35	+/-0.02	0.69	+/-0.04	0.61	+/-0.03	0.54	+/-0.02	88.8	+/-3.6	6.3	+/-0.7	5.9	+/-0.7
common 4	80	dssp	2	PHD	70.1	+/-1.5	74.8	+/-4.6	76.8	+/-4.4	60.6	+/-4.0	66.1	+/-4.1	71.1	+/-2.0	70.1	+/-1.7	64.5	+/-2.0	59.7	+/-3.9	73.5	+/-2.8	62.1	+/-2.0	4.7	+/-0.9	0.29	+/-0.02	0.63	+/-0.04	0.53	+/-0.03	0.48	+/-0.02	81.2	+/-4.4	9.5	+/-1.1	8.0	+/-1.1

subset	nprot	sots	rank	method	Q3	ERRsigQ3	Q3H%o	ERRsigQ3H%o	Q3H%p	ERRsigQ3H%p	Q3E%o	ERRsigQ3E%o	Q3E%p	ERRsigQ3E%p	Q3L%o	ERRsigQ3L%o	Q3L%p	ERRsigQ3L%p	sov	ERRsigsov	sovH	ERRsigsovH	sovE	ERRsigsovE	sovL	ERRsigsovL	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass	contDH	ERRsigcontDH	contDE	ERRsigcontDE
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	156	dssp	1	PROFsec	74.2	+/-0.9	77.8	+/-3.2	81.6	+/-3.3	70.5	+/-3.1	69.5	+/-3.1	73.5	+/-1.2	74.2	+/-1.0	70.1	+/-1.3	68.9	+/-2.7	77.2	+/-2.0	65.6	+/-1.4	2.8	+/-0.4	0.34	+/-0.01	0.69	+/-0.02	0.61	+/-0.02	0.54	+/-0.02	84.6	+/-2.9	6.9	+/-0.6	7.1	+/-0.7
				PSIpred	74.6	+/-1.0	82.0	+/-2.9	79.2	+/-2.9	65.5	+/-2.9	73.4	+/-3.3	75.2	+/-1.2	74.5	+/-1.1	70.9	+/-1.5	75.0	+/-2.2	74.9	+/-2.1	67.9	+/-1.5	2.8	+/-0.4	0.36	+/-0.01	0.69	+/-0.02	0.62	+/-0.02	0.56	+/-0.02	84.0	+/-2.9	6.9	+/-0.7	6.2	+/-0.5
				SAM-T99sec	74.2	+/-0.9	83.6	+/-3.0	76.8	+/-2.7	63.3	+/-2.8	75.0	+/-3.3	72.3	+/-1.4	73.5	+/-1.2	69.4	+/-1.3	72.8	+/-2.3	73.9	+/-2.0	65.1	+/-1.5	2.7	+/-0.4	0.34	+/-0.01	0.69	+/-0.02	0.61	+/-0.02	0.54	+/-0.02	88.5	+/-2.6	6.9	+/-0.6	6.4	+/-0.6
common 5	156	dssp	2	PHDpsi	71.8	+/-1.0	76.5	+/-3.2	78.7	+/-3.2	62.1	+/-2.8	68.9	+/-3.0	72.9	+/-1.3	71.0	+/-1.1	66.4	+/-1.3	67.1	+/-2.6	72.4	+/-2.1	63.0	+/-1.3	2.9	+/-0.4	0.30	+/-0.01	0.66	+/-0.02	0.56	+/-0.02	0.50	+/-0.01	82.7	+/-3.0	8.3	+/-0.7	8.0	+/-0.8
common 5	156	dssp	3	PHD	69.7	+/-1.0	74.8	+/-3.2	76.8	+/-3.2	60.6	+/-2.8	66.1	+/-2.9	71.4	+/-1.3	70.3	+/-1.2	64.7	+/-1.4	64.4	+/-2.7	70.9	+/-2.1	62.2	+/-1.3	4.3	+/-0.6	0.28	+/-0.01	0.63	+/-0.03	0.53	+/-0.02	0.48	+/-0.01	80.1	+/-3.2	9.4	+/-0.8	8.4	+/-0.8

subset	nprot	sots	rank	method	Q3	ERRsigQ3	Q3H%o	ERRsigQ3H%o	Q3H%p	ERRsigQ3H%p	Q3E%o	ERRsigQ3E%o	Q3E%p	ERRsigQ3E%p	Q3L%o	ERRsigQ3L%o	Q3L%p	ERRsigQ3L%p	sov	ERRsigsov	sovH	ERRsigsovH	sovE	ERRsigsovE	sovL	ERRsigsovL	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass	contDH	ERRsigcontDH	contDE	ERRsigcontDE
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	242	dssp	1	PROFsec	74.5	+/-0.8	77.8	+/-2.4	81.6	+/-2.5	70.5	+/-2.5	69.5	+/-2.5	73.5	+/-0.9	73.3	+/-0.8	71.1	+/-1.1	69.5	+/-2.1	75.5	+/-1.7	66.3	+/-1.0	2.8	+/-0.3	0.34	+/-0.01	0.69	+/-0.02	0.61	+/-0.02	0.54	+/-0.01	83.5	+/-2.4	6.7	+/-0.5	6.5	+/-0.6
				PSIpred	75.2	+/-0.8	82.0	+/-2.1	79.2	+/-2.1	65.5	+/-2.4	73.4	+/-2.7	75.0	+/-0.9	74.1	+/-0.8	72.1	+/-1.1	75.0	+/-1.8	74.3	+/-1.7	68.6	+/-1.1	2.8	+/-0.3	0.36	+/-0.01	0.69	+/-0.02	0.62	+/-0.02	0.56	+/-0.01	83.5	+/-2.4	6.6	+/-0.5	5.9	+/-0.4
common 6	242	dssp	2	PHDpsi	72.0	+/-0.8	76.5	+/-2.4	78.7	+/-2.4	62.1	+/-2.3	68.9	+/-2.5	72.5	+/-1.0	70.3	+/-0.9	67.4	+/-1.1	67.2	+/-2.0	71.2	+/-1.8	63.6	+/-1.0	3.0	+/-0.3	0.31	+/-0.01	0.66	+/-0.02	0.56	+/-0.02	0.50	+/-0.01	81.0	+/-2.5	8.1	+/-0.5	7.4	+/-0.6
common 6	242	dssp	3	PHD	70.1	+/-0.8	74.8	+/-2.4	76.8	+/-2.4	60.6	+/-2.3	66.1	+/-2.5	70.9	+/-1.0	69.6	+/-0.9	65.8	+/-1.1	65.2	+/-2.0	69.7	+/-1.8	62.5	+/-1.1	4.1	+/-0.4	0.28	+/-0.01	0.63	+/-0.02	0.53	+/-0.02	0.48	+/-0.01	78.9	+/-2.6	8.7	+/-0.6	7.8	+/-0.6

Last update: Jul 9, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva

Home - Secondary structure Comparative modelling Contacts Threading - search - FTP - Mirrors - Top