EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	465	73	method/index.html

APSSP	124	25	method/apssp.html
JPred	358	65	method/jpred.html
PHD	427	72	method/phd.html
PHDpsi	428	72	method/phdpsi.html
PROF_king	364	56	method/prof_king.html
PROFsec	388	70	method/profsec.html
PSIpred	417	71	method/psipred.html
PSSP	369	57	method/pssp.html
SAM-T99sec	260	56	method/samt99_sec.html
SSpro1	275	44	method/sspro1.html
SSpro2	131	24	method/sspro2.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 62 proteins and 9 methods (HTML - ASCII)
- set 2: 63 proteins and 8 methods (HTML - ASCII)
- set 3: 112 proteins and 8 methods (HTML - ASCII)
- set 4: 126 proteins and 7 methods (HTML - ASCII)
- set 5: 214 proteins and 6 methods (HTML - ASCII)
- set 6: 386 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	62	dssp	1	JPred	73.9	+/-1.4	70.0	+/-2.4	0.34	+/-0.02	75.8	+/-5.5
				PHDpsi	73.9	+/-1.2	70.6	+/-1.6	0.34	+/-0.02	77.4	+/-5.4
				PROF_king	74.5	+/-1.1	70.0	+/-2.0	0.34	+/-0.02	77.4	+/-5.4
				PROFsec	75.2	+/-1.2	72.9	+/-1.7	0.35	+/-0.02	75.8	+/-5.5
				PSIpred	76.9	+/-1.1	74.6	+/-1.8	0.39	+/-0.02	82.3	+/-4.9
				SAM-T99sec	75.7	+/-1.1	71.6	+/-1.9	0.35	+/-0.02	79.0	+/-5.2
				SSpro2	75.6	+/-1.1	70.0	+/-1.8	0.35	+/-0.02	77.4	+/-5.4
common 1	62	dssp	2	PHD	70.0	+/-1.4	67.1	+/-1.6	0.28	+/-0.02	75.8	+/-5.5
common 1	62	dssp	3	APSSP	68.5	+/-1.5	61.6	+/-2.2	0.25	+/-0.02	74.2	+/-5.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	63	dssp	1	JPred	74.1	+/-1.4	70.4	+/-2.4	0.34	+/-0.02	76.2	+/-5.4
				PHDpsi	74.0	+/-1.1	70.6	+/-1.6	0.34	+/-0.02	77.8	+/-5.3
				PROF_king	74.6	+/-1.1	69.9	+/-1.9	0.33	+/-0.02	77.8	+/-5.3
				PROFsec	75.3	+/-1.1	72.9	+/-1.6	0.35	+/-0.02	76.2	+/-5.4
				PSIpred	77.0	+/-1.1	74.4	+/-1.8	0.39	+/-0.02	82.5	+/-4.8
				SAM-T99sec	75.9	+/-1.1	71.6	+/-1.8	0.35	+/-0.02	79.4	+/-5.1
				SSpro2	75.6	+/-1.1	69.9	+/-1.8	0.35	+/-0.02	77.8	+/-5.3
common 2	63	dssp	2	PHD	70.2	+/-1.3	67.2	+/-1.6	0.28	+/-0.02	76.2	+/-5.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	112	dssp	1	JPred	75.5	+/-0.9	68.4	+/-1.5	0.34	+/-0.02	79.5	+/-3.8
				PHDpsi	74.6	+/-0.9	68.4	+/-1.4	0.24	+/-0.07	81.2	+/-3.7
				PROF_king	74.3	+/-0.9	68.3	+/-1.5	0.32	+/-0.01	83.0	+/-3.6
				PROFsec	76.2	+/-0.9	71.5	+/-1.4	0.34	+/-0.01	82.1	+/-3.6
				PSIpred	76.2	+/-1.0	71.4	+/-1.5	0.36	+/-0.02	84.8	+/-3.4
				SAM-T99sec	76.2	+/-1.0	70.9	+/-1.4	0.35	+/-0.02	83.9	+/-3.5
				SSpro1	75.8	+/-1.0	68.8	+/-1.6	0.35	+/-0.02	80.4	+/-3.8
common 3	112	dssp	2	PHD	71.8	+/-1.0	66.9	+/-1.4	0.20	+/-0.07	81.2	+/-3.7

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	126	dssp	1	JPred	75.5	+/-0.9	69.2	+/-1.4	0.34	+/-0.01	77.8	+/-3.7
				PHDpsi	74.8	+/-0.8	69.3	+/-1.3	0.26	+/-0.07	81.0	+/-3.5
				PROFsec	76.4	+/-0.8	72.0	+/-1.3	0.35	+/-0.01	82.5	+/-3.4
				PSIpred	76.4	+/-0.9	72.0	+/-1.4	0.36	+/-0.01	84.9	+/-3.2
				SAM-T99sec	76.4	+/-0.9	71.3	+/-1.3	0.35	+/-0.01	83.3	+/-3.3
				SSpro1	76.2	+/-0.9	69.7	+/-1.5	0.35	+/-0.01	81.0	+/-3.5
common 4	126	dssp	2	PHD	72.2	+/-0.9	67.8	+/-1.3	0.22	+/-0.07	81.0	+/-3.5

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	214	dssp	1	PROFsec	76.3	+/-0.6	72.2	+/-0.9	0.35	+/-0.01	80.4	+/-2.7
				PSIpred	76.2	+/-0.7	71.6	+/-1.0	0.36	+/-0.01	81.3	+/-2.7
				SSpro1	76.0	+/-0.7	70.4	+/-1.0	0.35	+/-0.01	80.8	+/-2.7
common 5	214	dssp	2	JPred	74.6	+/-0.6	69.1	+/-1.0	0.33	+/-0.01	76.6	+/-2.9
				PHDpsi	74.4	+/-0.6	69.1	+/-0.9	0.28	+/-0.04	78.5	+/-2.8
common 5	214	dssp	3	PHD	71.7	+/-0.7	67.3	+/-0.9	0.24	+/-0.04	77.1	+/-2.9

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	386	dssp	1	PROFsec	76.3	+/-0.5	72.6	+/-0.7	0.36	+/-0.01	81.6	+/-2.0
				PSIpred	76.4	+/-0.5	72.3	+/-0.8	0.37	+/-0.01	83.7	+/-1.9
common 6	386	dssp	2	PHDpsi	74.2	+/-0.5	69.4	+/-0.7	0.30	+/-0.02	79.8	+/-2.0
common 6	386	dssp	3	PHD	71.2	+/-0.6	67.1	+/-0.7	0.26	+/-0.02	76.9	+/-2.1