EVA: Detailed information for proteins added on: 2000_09_13

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2000_09_13	1f48	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: ARSENITE-TRANSLOCATING ATPASE; CHAIN: A; FRAGMENT: WHOLE PROTEIN WITH C-TERMINAL 6XHISTIDINE TAG; SYNONYM: ARSA ATPASE; EC: 3.6.1.-; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	T.ZHOU,S.RADAEV,B.P.ROSEN,D.L.GATTI	1f48	2000_09_13
2000_09_13	1few	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	APOPTOSIS	MOLECULE: SECOND MITOCHONDRIA-DERIVED ACTIVATOR OF CASPASES; CHAIN: A; FRAGMENT: SMAC/DIABLO; ENGINEERED: YES	HOMO SAPIENS; HUMAN;	J.CHAI,Y.SHI	1few	2000_09_13
2000_09_13	1d3g	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	MOLECULE: DIHYDROOROTATE DEHYDROGENASE; CHAIN: A; EC: 1.3.3.1; ENGINEERED: YES	HOMO SAPIENS; HUMAN;	S.LIU,E.A.NEIDHARDT,T.H.GROSSMAN,T.OCAIN,J.CLARDY	1d3g	2000_09_13
2000_09_13	1dqc	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ANTIMICROBIAL PROTEIN	MOLECULE: TACHYCITIN; CHAIN: A	TACHYPLEUS TRIDENTATUS; HORSESHOE CRAB; CELL: HEMOCYTE	T.SUETAKE,S.TSUDA,S.KAWABATA,K.MIURA,K.KAWANO	1dqc	2000_09_13
2000_09_13	1eo6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	PROTEIN BINDING	MOLECULE: GOLGI-ASSOCIATED ATPASE ENHANCER OF 16 KD; CHAIN: A, B; SYNONYM: GATE-16; ENGINEERED: YES	BOS TAURUS; BOVINE; ORGAN: BRAIN;	Y.PAZ,Z.ELAZAR,D.FASS	1eo6	2000_09_13
2000_09_13	1evs	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CYTOKINE	MOLECULE: ONCOSTATIN M; CHAIN: A; ENGINEERED: YES; OTHER_DETAILS: C-TERMINAL TRUNCATION	HOMO SAPIENS; HUMAN;	M.C.DELLER,K.R.HUDSON,S.IKEMIZU,J.BRAVO,E.Y.JONES,J.K.HEATH	1evs	2000_09_13

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field