| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2004_02 | THIS_month:psum | 2.0 | 2.0 | 14.7 | 9.1 | 17.5 | 24.2 | 50.0 | 37.8 | 28.4 | 31.6 | 83.8 |
| fr | 2004_02 | 1j1t:A | 1.2 | 1.6 | -1.696667e+01 | -2.643319e+00 | 4.8e+00 | 5.3e+00 | 1.6e+01 | 5.1 | 7.0e+00 | 9.2e+00 | 228 |
| fr | 2004_02 | 1nxh:A | 3.0 | 2.0 | -1.454273e+01 | 5.275967e-01 | 3.4e+00 | 7.6e+00 | 3.5e+01 | 8.9 | 1.9e+01 | 2.0e+01 | 119 |
| fr | 2004_02 | 1oj5:A | 2.7 | 2.0 | -1.071579e+01 | -3.840784e+00 | 5.7e+00 | 1.0e+01 | 5.4e+01 | 0.52 | 1.7e+01 | 2.7e+01 | 105 |
| fr | 2004_02 | 1pxe:A | 0.9 | 1.6 | -2.776364e+01 | -1.249285e+01 | 6.2e+00 | 1.2e+01 | 4.6e+01 | 2.6 | 2.1e+01 | 2.7e+01 | 48 |
| fr | 2004_02 | 1pzq:A | 2.8 | 3.1 | -2.346469e+01 | -3.019095e+00 | 1.5e+01 | 2.7e+01 | 4.3e+01 | 10 | 3.3e+01 | 3.7e+01 | 60 |
| fr | 2004_02 | 1pzr:A | 2.5 | 2.6 | -1.357333e+01 | 4.369982e+00 | 3.7e+01 | 3.7e+01 | 7.5e+01 | 2.0 | 3.0e+01 | 3.2e+01 | 60 |
| fr | 2004_02 | 1qz8:A | 0.6 | 1.6 | -2.620451e+01 | -5.501535e+00 | 3.6e+00 | 9.0e+00 | 2.1e+01 | 1.7 | 1.6e+01 | 1.7e+01 | 111 |
| fr | 2004_02 | 1r6r:A | 1.8 | 1.6 | -2.035663e+01 | -7.499347e+00 | 0.0e+00 | 6.2e+00 | 3.8e+01 | 5.0 | 1.1e+01 | 1.5e+01 | 80 |
| fr | 2004_02 | 1rj1:A | 1.2 | 1.2 | -1.369607e+01 | 1.728985e+00 | 2.0e+00 | 4.1e+00 | 2.8e+01 | 111 | 1.1e+01 | 1.5e+01 | 148 |
| fr | 2004_02 | 1s0y:B | 8.4 | 4.9 | 1.479712e+01 | 4.188654e+01 | 9.5e+01 | 1.0e+02 | 1.0e+02 | 0.01 | 9.5e+01 | 1.0e+02 | 55 |
| fr | 2004_02 | 1s5l:H | 0.6 | 1.2 | -2.908571e+01 | -1.152453e+01 | 2.1e+01 | 2.5e+01 | 4.0e+01 | 101 | 2.5e+01 | 3.2e+01 | 53 |
| fr | 2004_02 | 1s5l:I | 0.6 | 0.7 | -3.054000e+01 | -1.607259e+01 | 1.6e+01 | 2.6e+01 | 5.3e+01 | 74 | 4.2e+01 | 4.5e+01 | 38 |
| fr | 2004_02 | 1s5l:J | 2.7 | 2.8 | 5.529386e+00 | 7.894243e+00 | 3.9e+01 | 6.1e+01 | 8.2e+01 | 32 | 5.8e+01 | 5.8e+01 | 38 |
| fr | 2004_02 | 1s5l:L | 0.6 | 0.7 | -3.214737e+01 | -1.650811e+01 | 3.5e+01 | 3.5e+01 | 5.1e+01 | 54 | 2.7e+01 | 3.5e+01 | 37 |
| fr | 2004_02 | 1s5l:M | 1.3 | 2.6 | -2.262222e+01 | -2.006833e+01 | 1.3e+01 | 3.0e+01 | 9.0e+01 | 59 | 5.3e+01 | 5.3e+01 | 30 |
| fr | 2004_02 | 1s5l:T | 0.5 | 0 | -3.393333e+01 | -1.970323e+01 | 9.7e+00 | 1.9e+01 | 5.8e+01 | 285 | 0.0e+00 | 0.0e+00 | 31 |
| fr | 2004_02 | 1s5l:X | 0.5 | 1.6 | -2.262222e+01 | -1.527000e+01 | 1.2e+01 | 2.5e+01 | 6.8e+01 | 13 | 3.2e+01 | 3.8e+01 | 40 |
| fr | 2004_02 | 1s5l:Z | 1.8 | 2.6 | -3.054000e+01 | -1.052823e+01 | 2.4e+01 | 3.1e+01 | 3.4e+01 | 27 | 2.9e+01 | 2.9e+01 | 58 |
| fr | 2004_02 | 1s68:A | 1.7 | 2.0 | -6.694221e+00 | -1.852733e-01 | 4.3e-01 | 1.3e+00 | 3.9e+01 | 0.12 | 1.1e+01 | 1.4e+01 | 233 |
| fr | 2004_02 | 1s7b:A | 3.5 | 3.7 | 2.534753e+01 | 6.218160e+00 | 2.4e+01 | 2.5e+01 | 2.5e+01 | 35 | 2.4e+01 | 2.4e+01 | 106 |
| fr | 2004_02 | 1ufi:A | 1.7 | 2.8 | -2.174230e+01 | -9.386719e+00 | 1.7e+01 | 3.1e+01 | 5.8e+01 | 6.3 | 4.4e+01 | 4.6e+01 | 48 |
| fr | 2004_02 | 1ujx:A | 4.1 | 2.0 | 1.344073e+01 | 1.091129e+00 | 1.7e+00 | 5.9e+00 | 4.7e+01 | 0.09 | 2.0e+01 | 2.4e+01 | 119 |
| fr | 2004_02 | THIS_month:psum | 2.0 | 2.0 | 14.7 | 9.1 | 17.5 | 24.2 | 50.0 | 37.8 | 28.4 | 31.6 | 83.8 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |