| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2004_02 | THIS_month:psum | 4.9 | 3.3 | 16.8 | 15.0 | 37.4 | 48.8 | 86.0 | 20.1 | 54.5 | 59.7 | 82.8 |
| fr | 2004_02 | 1j1t:A | 2.3 | 2.8 | -3.678416e+00 | 2.500226e+00 | 7.0e+00 | 1.3e+01 | 7.2e+01 | 6.48e-01 | 2.8e+01 | 3.2e+01 | 228 |
| fr | 2004_02 | 1nxh:A | 2.4 | 2.8 | 6.503085e+00 | 4.980501e+00 | 2.5e+00 | 4.2e+00 | 8.7e+01 | 1.60e+00 | 2.4e+01 | 3.2e+01 | 119 |
| fr | 2004_02 | 1oj5:A | 12.1 | 4.1 | -5.930097e+00 | 1.792387e+01 | 4.3e+01 | 7.0e+01 | 9.8e+01 | 1.33e-03 | 6.4e+01 | 6.9e+01 | 105 |
| fr | 2004_02 | 1pxe:A | 1.3 | 1.2 | -1.850909e+01 | -1.250121e+01 | 1.2e+01 | 2.7e+01 | 6.9e+01 | 1.78e+01 | 2.3e+01 | 3.1e+01 | 48 |
| fr | 2004_02 | 1pzq:A | 1.7 | 2.8 | 1.219045e+01 | 9.800617e+00 | 1.3e+01 | 1.8e+01 | 9.0e+01 | 0.00e+00 | 4.3e+01 | 4.8e+01 | 60 |
| fr | 2004_02 | 1pzr:A | 3.8 | 3.5 | -1.053103e+01 | 8.345528e+00 | 2.2e+01 | 4.0e+01 | 9.7e+01 | 7.16e+00 | 4.7e+01 | 5.2e+01 | 60 |
| fr | 2004_02 | 1qz8:A | 1.9 | 2.6 | -4.791073e+00 | 3.368518e-01 | 2.7e+00 | 7.2e+00 | 8.8e+01 | 4.30e+00 | 2.3e+01 | 3.8e+01 | 111 |
| fr | 2004_02 | 1rj1:A | 9.1 | 4.1 | 9.857020e+00 | 1.130787e+01 | 1.5e+01 | 2.7e+01 | 8.6e+01 | 4.67e+00 | 4.6e+01 | 5.2e+01 | 148 |
| fr | 2004_02 | 1s0y:B | 8.4 | 4.9 | 1.700290e+01 | 4.203621e+01 | 9.3e+01 | 1.0e+02 | 1.0e+02 | 1.56e-02 | 9.3e+01 | 1.0e+02 | 55 |
| fr | 2004_02 | 1s5l:H | 3.7 | 3.5 | -8.451171e+00 | 1.120521e+01 | 4.0e+01 | 5.3e+01 | 8.1e+01 | 9.86e+00 | 5.5e+01 | 5.7e+01 | 53 |
| fr | 2004_02 | 1s5l:I | 4.5 | 3.7 | 2.778456e+01 | 2.328069e+01 | 5.8e+01 | 6.8e+01 | 8.4e+01 | 1.08e+02 | 6.8e+01 | 7.1e+01 | 38 |
| fr | 2004_02 | 1s5l:J | 3.9 | 3.7 | 3.001300e+01 | 2.483926e+01 | 6.6e+01 | 7.4e+01 | 7.9e+01 | 2.72e+01 | 6.8e+01 | 7.6e+01 | 38 |
| fr | 2004_02 | 1s5l:L | 3.7 | 3.7 | 2.948042e+01 | 1.548289e+01 | 5.7e+01 | 7.3e+01 | 1.0e+02 | 2.07e+00 | 6.8e+01 | 6.8e+01 | 37 |
| fr | 2004_02 | 1s5l:M | 3.9 | 3.5 | 1.316944e+00 | 2.306773e+01 | 7.7e+01 | 9.0e+01 | 9.7e+01 | 7.48e+01 | 8.7e+01 | 9.0e+01 | 30 |
| fr | 2004_02 | 1s5l:T | 3.7 | 2.8 | -6.946037e-01 | 1.541751e+01 | 6.5e+01 | 7.4e+01 | 9.0e+01 | 6.97e+01 | 7.7e+01 | 7.7e+01 | 31 |
| fr | 2004_02 | 1s5l:X | 4.9 | 3.9 | 3.184107e+00 | 2.255082e+01 | 3.8e+01 | 6.8e+01 | 9.5e+01 | 1.23e+01 | 7.8e+01 | 7.8e+01 | 40 |
| fr | 2004_02 | 1s5l:Z | 4.0 | 3.5 | 4.012159e+01 | 1.540519e+01 | 4.1e+01 | 4.1e+01 | 5.5e+01 | 2.23e+01 | 4.5e+01 | 5.0e+01 | 58 |
| fr | 2004_02 | 1s68:A | 14.6 | 3.9 | 7.960933e+00 | 7.729788e+00 | 2.1e+01 | 3.2e+01 | 8.1e+01 | 1.17e+00 | 4.5e+01 | 5.5e+01 | 233 |
| fr | 2004_02 | THIS_month:psum | 4.9 | 3.3 | 16.8 | 15.0 | 37.4 | 48.8 | 86.0 | 20.1 | 54.5 | 59.7 | 82.8 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |