| METHOD about: | ../../../doc/explain_methods.html#PX_about_superfamily |
| METHOD url: | Superfamily |
| TYPE : | fr |
| NPROT : | 297 |
| NWEEKS : | 130 |
| NOTE 1 : | here ALL results obtained for Superfamily in month 2004_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.7 | 1.9 | 1.1 | 2.2 | 12.5 | 17.7 | 45.6 | 2.0 | 23.5 | 27.3 | 151.8 |
| fr | 2004_01 | THIS_month:psum | 2.6 | 2.1 | 29.7 | 14.5 | 19.2 | 22.4 | 46 | 0.3 | 24.6 | 29.4 | 139.2 |
| fr | 2004_01 | 1m36:A | 3.6 | 3.7 | 3.150817e+01 | 2.864379e+01 | 7.9e+01 | 8.2e+01 | 9.1e+01 | 1.20E-07 | 7.3e+01 | 8.2e+01 | 33 |
| fr | 2004_01 | 1nnv:A | 0.3 | 2.0 | -1.420355e+01 | -4.545890e+00 | 1.9e+00 | 6.5e+00 | 4.0e+01 | 1.20E+00 | 9.3e+00 | 1.9e+01 | 107 |
| fr | 2004_01 | 1ogk:A | 0.4 | 0.7 | -9.396923e+00 | 8.589406e-01 | 8.7e-01 | 3.5e+00 | 2.8e+01 | 6.40E-02 | 7.0e+00 | 9.6e+00 | 229 |
| fr | 2004_01 | 1p57:A | 10.8 | 4.2 | -6.502509e+00 | 1.237388e+01 | 4.8e+01 | 6.0e+01 | 7.5e+01 | 2.80E-04 | 5.7e+01 | 6.6e+01 | 110 |
| fr | 2004_01 | 1p94:A | 6.4 | 4.4 | 2.795463e+01 | 1.618424e+01 | 5.1e+01 | 5.3e+01 | 5.8e+01 | 3.90E-04 | 5.0e+01 | 5.3e+01 | 76 |
| fr | 2004_01 | 1pc6:A | 2.9 | 2.0 | -4.448265e+00 | -2.198597e+00 | 0.0e+00 | 0.0e+00 | 5.6e+01 | 3.50E-02 | 1.6e+01 | 2.1e+01 | 141 |
| fr | 2004_01 | 1r2m:A | 0.3 | 0.0 | -2.036000e+01 | -8.725714e+00 | 0.0e+00 | 1.4e+00 | 4.3e+01 | 9.70E-01 | 1.6e+01 | 1.7e+01 | 70 |
| fr | 2004_01 | 1rh5:B | 0.1 | 0 | -5.090000e+01 | -1.090714e+01 | 1.1e+01 | 1.4e+01 | 2.1e+01 | 4.60E-01 | 0.0e+00 | 0.0e+00 | 56 |
| fr | 2004_01 | 1rhz:A | 0.6 | 2.8 | -7.928846e+00 | -3.408017e-01 | 0.0e+00 | 0.0e+00 | 1.8e+01 | 5.30E-02 | 5.8e+00 | 6.7e+00 | 432 |
| fr | 2004_01 | 1rpu:A | 0.6 | 1.2 | -1.454286e+01 | -3.992535e+00 | 7.2e-01 | 4.3e+00 | 3.0e+01 | 8.40E-01 | 1.2e+01 | 2.0e+01 | 138 |
| fr | 2004_01 | THIS_month:psum | 2.6 | 2.1 | 29.7 | 14.5 | 19.2 | 22.4 | 46 | 0.3 | 24.6 | 29.4 | 139.2 |
| fr | 2004_03_05 | psum | 2.7 | 1.9 | 1.1 | 2.2 | 12.5 | 17.7 | 45.6 | 2.0 | 23.5 | 27.3 | 151.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |