| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2004_01 | THIS_month:psum | 1.6 | 1.8 | 39.4 | 6.3 | 11.6 | 14.9 | 44.4 | 15.0 | 20.1 | 21.3 | 129.4 |
| fr | 2004_01 | 1m36:A | 2.9 | 2.8 | 3.940898e+01 | -1.850909e+01 | 7.0e+01 | 7.3e+01 | 7.3e+01 | 1.4 | 7.3e+01 | 7.3e+01 | 33 |
| fr | 2004_01 | 1nnv:A | 2.6 | 3.1 | -7.876619e+00 | -1.160607e+00 | 9.3e-01 | 1.9e+00 | 7.2e+01 | 2.9 | 2.6e+01 | 2.8e+01 | 107 |
| fr | 2004_01 | 1ogk:A | 1.6 | 0.7 | -6.778290e+00 | -7.012872e-01 | 8.7e-01 | 2.6e+00 | 3.9e+01 | 1.5 | 1.0e+01 | 1.3e+01 | 229 |
| fr | 2004_01 | 1p57:A | 2.0 | 2.3 | -9.116417e+00 | -3.002270e+00 | 0.0e+00 | 0.0e+00 | 6.1e+01 | 1.1 | 2.1e+01 | 2.2e+01 | 110 |
| fr | 2004_01 | 1p94:A | 1.2 | 0 | -3.817500e+01 | -8.036842e+00 | 7.9e+00 | 1.6e+01 | 2.1e+01 | 1.6 | 0.0e+00 | 0.0e+00 | 76 |
| fr | 2004_01 | 1pc6:A | 1.3 | 2.3 | -3.053934e+01 | -4.066223e+00 | 5.0e+00 | 1.1e+01 | 1.4e+01 | 1.7 | 1.1e+01 | 1.2e+01 | 141 |
| fr | 2004_01 | 1r2m:A | 0.7 | 2.0 | -2.544992e+01 | -8.725714e+00 | 8.6e+00 | 1.6e+01 | 3.4e+01 | 26 | 2.0e+01 | 2.3e+01 | 70 |
| fr | 2004_01 | 1rh5:B | 2.9 | 2.8 | -3.114685e+00 | 6.387207e+00 | 2.7e+01 | 2.9e+01 | 8.2e+01 | 8.1 | 4.5e+01 | 4.5e+01 | 56 |
| fr | 2004_01 | 1rh5:C | 0.2 | 0 | -3.214737e+01 | -1.908750e+01 | 3.1e+00 | 9.4e+00 | 5.9e+01 | 22 | 0.0e+00 | 0.0e+00 | 32 |
| fr | 2004_01 | 1rhz:A | 2.4 | 3.1 | -8.595683e+00 | -6.388073e-02 | 6.9e-01 | 1.2e+00 | 1.6e+01 | 97 | 7.6e+00 | 8.1e+00 | 432 |
| fr | 2004_01 | 1rpu:A | 0.6 | 1.2 | -2.443200e+01 | -4.412466e+00 | 4.3e+00 | 4.3e+00 | 1.8e+01 | 2.3 | 8.0e+00 | 1.1e+01 | 138 |
| fr | 2004_01 | THIS_month:psum | 1.6 | 1.8 | 39.4 | 6.3 | 11.6 | 14.9 | 44.4 | 15.0 | 20.1 | 21.3 | 129.4 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |