| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2004_01 | THIS_month:psum | 4.3 | 3.1 | 15.6 | 11.7 | 23.1 | 29.3 | 91.6 | 12.1 | 43.3 | 48.7 | 128.6 |
| fr | 2004_01 | 1m36:A | 3.4 | 3.3 | 3.871287e+01 | 2.698170e+01 | 7.3e+01 | 7.6e+01 | 9.7e+01 | 6.00e+01 | 7.0e+01 | 7.6e+01 | 33 |
| fr | 2004_01 | 1nnv:A | 2.0 | 1.2 | 6.939623e+00 | 4.990295e-01 | 2.8e+00 | 6.5e+00 | 7.9e+01 | 1.32e+00 | 2.3e+01 | 3.3e+01 | 107 |
| fr | 2004_01 | 1ogk:A | 2.3 | 2.6 | 3.008409e+00 | 2.409467e+00 | 1.7e+00 | 3.9e+00 | 9.8e+01 | 1.18e+00 | 1.5e+01 | 2.0e+01 | 229 |
| fr | 2004_01 | 1p57:A | 11.7 | 4.6 | -5.054833e+00 | 1.700259e+01 | 3.3e+01 | 4.7e+01 | 9.4e+01 | 1.70e-01 | 7.0e+01 | 7.6e+01 | 110 |
| fr | 2004_01 | 1p94:A | 6.8 | 4.6 | 3.304896e+01 | 1.869874e+01 | 5.7e+01 | 5.7e+01 | 9.9e+01 | 3.55e+00 | 5.7e+01 | 5.8e+01 | 76 |
| fr | 2004_01 | 1pc6:A | 2.1 | 2.3 | 7.739129e+00 | 4.433108e+00 | 1.4e+00 | 3.5e+00 | 8.4e+01 | 9.04e-01 | 2.1e+01 | 2.8e+01 | 141 |
| fr | 2004_01 | 1r2m:A | 4.8 | 2.3 | -2.719371e+00 | -4.253036e+00 | 7.1e+00 | 2.0e+01 | 7.7e+01 | 7.24e+00 | 3.1e+01 | 4.1e+01 | 70 |
| fr | 2004_01 | 1rh5:B | 4.3 | 3.9 | 1.724052e+01 | 1.521244e+01 | 7.1e+00 | 1.8e+01 | 9.8e+01 | 3.31e+01 | 5.9e+01 | 6.4e+01 | 56 |
| fr | 2004_01 | 1rh5:C | 2.7 | 3.3 | -1.970323e+01 | 1.933532e+01 | 4.7e+01 | 5.9e+01 | 9.7e+01 | 1.43e+01 | 7.5e+01 | 7.5e+01 | 32 |
| fr | 2004_01 | 1rhz:A | 3.0 | 3.3 | 2.728051e+00 | 1.438672e+00 | 9.3e-01 | 2.5e+00 | 9.3e+01 | 7.29e-02 | 1.2e+01 | 1.6e+01 | 432 |
| fr | 2004_01 | THIS_month:psum | 4.3 | 3.1 | 15.6 | 11.7 | 23.1 | 29.3 | 91.6 | 12.1 | 43.3 | 48.7 | 128.6 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |