| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2004_01 | THIS_month:psum | 2.4 | 2.1 | 13.7 | 13.1 | 11.2 | 16.2 | 82.5 | 12.1 | 32.7 | 36.0 | 128.6 |
| fr | 2004_01 | 1m36:A | 3.4 | 3.3 | 2.469513e+01 | 2.095344e+01 | 7.3e+01 | 7.6e+01 | 8.5e+01 | 6.00e+01 | 7.0e+01 | 7.6e+01 | 33 |
| fr | 2004_01 | 1nnv:A | 0.4 | 0.7 | -6.742246e+00 | -4.860966e+00 | 2.8e+00 | 5.6e+00 | 7.9e+01 | 1.32e+00 | 2.3e+01 | 2.6e+01 | 107 |
| fr | 2004_01 | 1ogk:A | 0.8 | 1.6 | -2.648854e+00 | -3.300172e-01 | 0.0e+00 | 8.7e-01 | 7.6e+01 | 1.18e+00 | 8.7e+00 | 1.0e+01 | 229 |
| fr | 2004_01 | 1p57:A | 11.7 | 4.6 | -5.054833e+00 | 1.700259e+01 | 3.3e+01 | 4.7e+01 | 9.4e+01 | 1.70e-01 | 7.0e+01 | 7.6e+01 | 110 |
| fr | 2004_01 | 1p94:A | 0.5 | 1.2 | -8.138936e+00 | -7.935837e+00 | 0.0e+00 | 1.3e+00 | 9.9e+01 | 3.55e+00 | 1.6e+01 | 1.7e+01 | 76 |
| fr | 2004_01 | 1pc6:A | 2.1 | 2.3 | -4.996787e+00 | -1.013915e-01 | 0.0e+00 | 0.0e+00 | 8.4e+01 | 9.04e-01 | 2.1e+01 | 2.8e+01 | 141 |
| fr | 2004_01 | 1r2m:A | 2.2 | 2.3 | -1.489756e+01 | -8.468432e+00 | 0.0e+00 | 0.0e+00 | 5.9e+01 | 7.24e+00 | 2.4e+01 | 2.7e+01 | 70 |
| fr | 2004_01 | 1rh5:B | 0.9 | 1.2 | -1.420465e+01 | -1.070201e+01 | 0.0e+00 | 0.0e+00 | 7.7e+01 | 3.31e+01 | 2.7e+01 | 3.0e+01 | 56 |
| fr | 2004_01 | 1rh5:C | 0.6 | 1.2 | -1.970323e+01 | -3.882072e+00 | 3.1e+00 | 3.1e+01 | 9.7e+01 | 1.43e+01 | 6.2e+01 | 6.2e+01 | 32 |
| fr | 2004_01 | 1rhz:A | 1.5 | 3.3 | 2.728051e+00 | 1.438672e+00 | 2.3e-01 | 9.3e-01 | 7.5e+01 | 7.29e-02 | 5.6e+00 | 8.6e+00 | 432 |
| fr | 2004_01 | THIS_month:psum | 2.4 | 2.1 | 13.7 | 13.1 | 11.2 | 16.2 | 82.5 | 12.1 | 32.7 | 36.0 | 128.6 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |