| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2003_12 | THIS_month:psum | 1.2 | 1.6 | 11.2 | 4.9 | 12.1 | 17.9 | 61.4 | 49.5 | 28.3 | 31 | 84.7 |
| fr | 2003_12 | 1izm:A | 2.4 | 2.8 | -1.724797e+01 | 1.561797e+00 | 1.2e+00 | 5.4e+00 | 2.1e+01 | 117 | 1.6e+01 | 1.7e+01 | 168 |
| fr | 2003_12 | 1j27:A | 2.3 | 2.8 | -2.919227e+00 | 1.947038e+00 | 1.0e+00 | 6.1e+00 | 7.2e+01 | 3.5 | 3.4e+01 | 4.1e+01 | 98 |
| fr | 2003_12 | 1pc0:A | 0.5 | 1.2 | -1.597962e+01 | -9.130539e+00 | 0.0e+00 | 4.9e+00 | 6.2e+01 | 13 | 2.3e+01 | 2.5e+01 | 61 |
| fr | 2003_12 | 1pg6:A | 0.6 | 0 | -2.262222e+01 | -2.947735e+00 | 1.9e+00 | 3.4e+00 | 1.3e+01 | 9.8 | 0.0e+00 | 0.0e+00 | 206 |
| fr | 2003_12 | 1q3j:A | 5.2 | 3.3 | 1.124297e+01 | 1.124296e+01 | 8.6e+01 | 9.7e+01 | 1.0e+02 | 136 | 8.9e+01 | 9.2e+01 | 36 |
| fr | 2003_12 | 1q7s:A | 0.9 | 0.7 | -1.454286e+01 | -4.841546e+00 | 2.6e+00 | 5.1e+00 | 3.6e+01 | 11 | 9.4e+00 | 1.5e+01 | 117 |
| fr | 2003_12 | 1q90:L | 0.3 | 2.0 | -2.443200e+01 | -1.908750e+01 | 0.0e+00 | 6.2e+00 | 7.8e+01 | 184 | 2.8e+01 | 2.8e+01 | 32 |
| fr | 2003_12 | 1q90:M | -0.0 | 0 | -2.349231e+01 | -1.796471e+01 | 5.9e+00 | 1.8e+01 | 7.6e+01 | 40 | 0.0e+00 | 0.0e+00 | 34 |
| fr | 2003_12 | 1q90:N | 1.5 | 2.3 | -3.054000e+01 | -1.970323e+01 | 3.9e+01 | 5.5e+01 | 6.5e+01 | 84 | 5.2e+01 | 5.2e+01 | 31 |
| fr | 2003_12 | 1r48:A | 0.6 | 2.0 | -2.106207e+01 | -1.850909e+01 | 6.1e+00 | 1.2e+01 | 8.8e+01 | 30 | 3.9e+01 | 3.9e+01 | 33 |
| fr | 2003_12 | 1rf8:B | 1.3 | 2.6 | -8.036842e+00 | -3.146789e+00 | 1.0e+00 | 1.0e+00 | 7.6e+01 | 0.03 | 2.5e+01 | 3.1e+01 | 100 |
| fr | 2003_12 | 1rji:A | 0.1 | 1.2 | -2.443200e+01 | -1.970323e+01 | 1.3e+01 | 1.9e+01 | 8.1e+01 | 12 | 3.9e+01 | 4.8e+01 | 31 |
| fr | 2003_12 | 1roc:A | 0.5 | 0.7 | -1.265473e+01 | -3.757595e+00 | 0.0e+00 | 0.0e+00 | 3.1e+01 | 3.4 | 1.4e+01 | 1.5e+01 | 155 |
| fr | 2003_12 | THIS_month:psum | 1.2 | 1.6 | 11.2 | 4.9 | 12.1 | 17.9 | 61.4 | 49.5 | 28.3 | 31 | 84.7 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |