| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2003_12 | THIS_month:psum | 4.5 | 2.9 | 16.1 | 14.2 | 40.7 | 50.8 | 89.7 | 16.3 | 55.1 | 61.6 | 84.7 |
| fr | 2003_12 | 1izm:A | 6.0 | 3.5 | 4.916570e+00 | 7.911221e+00 | 3.0e+00 | 6.5e+00 | 9.0e+01 | 5.21e+00 | 2.9e+01 | 3.6e+01 | 168 |
| fr | 2003_12 | 1j27:A | 7.3 | 3.5 | 1.199876e+01 | 1.264314e+01 | 2.1e+01 | 5.5e+01 | 9.7e+01 | 1.37e+00 | 5.8e+01 | 7.0e+01 | 98 |
| fr | 2003_12 | 1pc0:A | 4.7 | 2.8 | -1.090694e+01 | 1.242027e+00 | 4.4e+01 | 6.1e+01 | 9.2e+01 | 1.53e+00 | 4.9e+01 | 6.2e+01 | 61 |
| fr | 2003_12 | 1pg6:A | 3.6 | 1.6 | -4.271321e+00 | 8.972918e-01 | 1.5e+00 | 3.9e+00 | 6.9e+01 | 1.39e+00 | 1.6e+01 | 2.3e+01 | 206 |
| fr | 2003_12 | 1q3j:A | 5.2 | 3.3 | 1.124297e+01 | 1.124296e+01 | 8.6e+01 | 9.7e+01 | 1.0e+02 | 1.26e-03 | 8.9e+01 | 9.2e+01 | 36 |
| fr | 2003_12 | 1q7s:A | 4.6 | 3.1 | -6.295729e+00 | 2.798855e+00 | 1.2e+01 | 2.5e+01 | 8.3e+01 | 5.22e+00 | 3.1e+01 | 4.3e+01 | 117 |
| fr | 2003_12 | 1q90:L | 4.2 | 3.5 | 2.357727e+01 | 2.401182e+01 | 8.1e+01 | 9.1e+01 | 1.0e+02 | 7.50e+01 | 8.8e+01 | 8.8e+01 | 32 |
| fr | 2003_12 | 1q90:M | 4.3 | 3.7 | -1.796471e+01 | 4.273986e+01 | 8.8e+01 | 8.8e+01 | 1.0e+02 | 1.01e+01 | 8.8e+01 | 8.8e+01 | 34 |
| fr | 2003_12 | 1q90:N | 3.5 | 3.5 | -2.262222e+01 | 2.549037e+01 | 8.1e+01 | 8.1e+01 | 8.7e+01 | 4.56e+01 | 8.1e+01 | 8.4e+01 | 31 |
| fr | 2003_12 | 1r48:A | 4.5 | 3.7 | 2.909688e+01 | 2.303756e+01 | 7.9e+01 | 9.1e+01 | 9.7e+01 | 4.94e+01 | 8.2e+01 | 8.2e+01 | 33 |
| fr | 2003_12 | 1rf8:B | 1.1 | 1.2 | -7.448780e+00 | -3.698026e+00 | 3.0e+00 | 6.0e+00 | 8.2e+01 | 3.22e+00 | 1.7e+01 | 2.2e+01 | 100 |
| fr | 2003_12 | 1rji:A | 1.6 | 1.2 | -2.023094e+01 | -1.969782e+01 | 2.6e+01 | 3.9e+01 | 9.7e+01 | 1.16e+01 | 4.5e+01 | 6.1e+01 | 31 |
| fr | 2003_12 | 1roc:A | 9.0 | 3.9 | -3.885219e+00 | 5.055041e+00 | 4.5e+00 | 1.6e+01 | 7.3e+01 | 3.38e+00 | 4.4e+01 | 5.0e+01 | 155 |
| fr | 2003_12 | THIS_month:psum | 4.5 | 2.9 | 16.1 | 14.2 | 40.7 | 50.8 | 89.7 | 16.3 | 55.1 | 61.6 | 84.7 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |