| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2003_11 | THIS_month:psum | 2.1 | 2.1 | 9.7 | 4.1 | 13.4 | 17.7 | 49.2 | 21.4 | 27.3 | 30.1 | 111.3 |
| fr | 2003_11 | 1kg1:A | 1.1 | 2.0 | -1.468354e+01 | -8.643206e+00 | 0.0e+00 | 3.3e+00 | 6.8e+01 | 32 | 2.0e+01 | 2.8e+01 | 60 |
| fr | 2003_11 | 1kom:A | 2.7 | 2.0 | -8.601829e+00 | -2.666340e+00 | 5.4e+00 | 1.1e+01 | 7.6e+01 | 0.11 | 3.0e+01 | 3.3e+01 | 93 |
| fr | 2003_11 | 1lmm:A | 0.9 | 2.0 | -2.443200e+01 | -1.527000e+01 | 1.0e+01 | 1.8e+01 | 6.2e+01 | 22 | 3.2e+01 | 3.8e+01 | 40 |
| fr | 2003_11 | 1mwq:A | 2.6 | 2.8 | -1.067987e+01 | 8.608222e-01 | 7.1e+00 | 1.3e+01 | 5.6e+01 | 2.7 | 2.2e+01 | 2.4e+01 | 99 |
| fr | 2003_11 | 1oa8:A | 1.2 | 2.6 | -1.327826e+01 | -3.808603e+00 | 4.7e+00 | 6.2e+00 | 3.6e+01 | 0.40 | 1.7e+01 | 2.3e+01 | 128 |
| fr | 2003_11 | 1oh1:A | 3.7 | 3.3 | -1.152453e+01 | 5.558995e+00 | 3.7e+00 | 7.3e+00 | 4.9e+01 | 1.9 | 2.8e+01 | 3.1e+01 | 109 |
| fr | 2003_11 | 1p65:A | 1.6 | 2.3 | -1.489737e+01 | -9.625867e+00 | 3.2e+01 | 3.2e+01 | 7.2e+01 | 4.9 | 4.2e+01 | 4.6e+01 | 57 |
| fr | 2003_11 | 1p68:A | 5.3 | 3.5 | 9.732396e+00 | 7.476896e+00 | 0.0e+00 | 2.0e+00 | 5.7e+01 | 0.63 | 3.7e+01 | 3.7e+01 | 102 |
| fr | 2003_11 | 1px5:A | 1.2 | 1.6 | -1.970323e+01 | -1.616234e+00 | 1.5e+00 | 3.4e+00 | 9.5e+00 | 5.5 | 4.6e+00 | 5.8e+00 | 327 |
| fr | 2003_11 | 1q68:A | 1.6 | 2.3 | -3.054000e+01 | -1.607368e+01 | 3.4e+01 | 4.5e+01 | 5.3e+01 | 8.8 | 4.2e+01 | 4.5e+01 | 38 |
| fr | 2003_11 | 1r8k:A | 4.1 | 0 | -2.036000e+01 | -1.863833e+00 | 9.4e+00 | 9.4e+00 | 9.4e+00 | 0.07 | 0.0e+00 | 0.0e+00 | 320 |
| fr | 2003_11 | 1ujl:A | 1.3 | 2.0 | -2.442617e+01 | -1.452613e+01 | 2.4e+01 | 3.8e+01 | 6.0e+01 | 2.1 | 3.6e+01 | 3.8e+01 | 42 |
| fr | 2003_11 | 1um3:F | 2.0 | 2.8 | -3.051968e+01 | 2.737569e+00 | 5.5e+01 | 5.5e+01 | 6.1e+01 | 196 | 6.1e+01 | 6.1e+01 | 33 |
| fr | 2003_11 | 1unn:C | 0.8 | 0.7 | -2.655652e+01 | -5.416996e+00 | 1.8e+00 | 5.4e+00 | 2.1e+01 | 23 | 1.1e+01 | 1.2e+01 | 111 |
| fr | 2003_11 | THIS_month:psum | 2.1 | 2.1 | 9.7 | 4.1 | 13.4 | 17.7 | 49.2 | 21.4 | 27.3 | 30.1 | 111.3 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |