| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2003_11 | THIS_month:psum | 7.0 | 3.3 | 11.0 | 14.8 | 32.9 | 41.5 | 91.2 | 14.4 | 52.6 | 58.7 | 106.0 |
| fr | 2003_11 | 1kg1:A | 2.5 | 1.2 | -1.014004e+01 | -4.681715e+00 | 1.2e+01 | 1.7e+01 | 1.0e+02 | 7.80e+00 | 3.0e+01 | 3.8e+01 | 60 |
| fr | 2003_11 | 1kom:A | 3.2 | 1.6 | -4.380013e+00 | -1.272071e+00 | 4.3e+00 | 9.7e+00 | 9.1e+01 | 4.50e+00 | 2.7e+01 | 3.2e+01 | 93 |
| fr | 2003_11 | 1lmm:A | 5.0 | 3.3 | 8.035388e+00 | 6.585308e+00 | 7.0e+01 | 8.2e+01 | 9.0e+01 | 7.84e+00 | 6.8e+01 | 8.2e+01 | 40 |
| fr | 2003_11 | 1mwq:A | 7.4 | 3.1 | -2.159425e+00 | 5.190479e+00 | 1.5e+01 | 3.3e+01 | 9.5e+01 | 7.59e-01 | 4.0e+01 | 5.1e+01 | 99 |
| fr | 2003_11 | 1oa8:A | 5.1 | 2.6 | -5.930097e+00 | 1.766403e+00 | 5.5e+00 | 9.4e+00 | 8.0e+01 | 4.04e+00 | 3.1e+01 | 3.8e+01 | 128 |
| fr | 2003_11 | 1oh1:A | 13.1 | 5.2 | 1.482708e+01 | 1.424596e+01 | 6.1e+01 | 7.4e+01 | 9.5e+01 | 5.85e-02 | 7.0e+01 | 7.9e+01 | 109 |
| fr | 2003_11 | 1p65:A | 1.7 | 2.3 | -1.128853e+01 | -2.433906e+00 | 1.6e+01 | 1.9e+01 | 9.5e+01 | 2.22e+01 | 3.7e+01 | 3.7e+01 | 57 |
| fr | 2003_11 | 1p68:A | 6.0 | 4.1 | 8.570282e+00 | 1.281760e+01 | 6.9e+00 | 1.5e+01 | 9.2e+01 | 3.90e+00 | 5.3e+01 | 5.8e+01 | 102 |
| fr | 2003_11 | 1px5:A | 16.2 | 5.2 | 7.479639e-02 | 5.454904e+00 | 1.6e+01 | 2.8e+01 | 9.3e+01 | 1.42e-08 | 4.5e+01 | 5.4e+01 | 327 |
| fr | 2003_11 | 1q68:A | 2.0 | 2.0 | -1.745143e+01 | -1.561395e+01 | 1.3e+01 | 3.4e+01 | 9.2e+01 | 3.93e+01 | 5.3e+01 | 5.8e+01 | 38 |
| fr | 2003_11 | 1r8k:A | 31.3 | 7.5 | 8.921205e-01 | 3.392129e+01 | 1.0e+02 | 1.0e+02 | 1.0e+02 | 1.66e-08 | 1.0e+02 | 1.0e+02 | 320 |
| fr | 2003_11 | 1ujl:A | 1.2 | 2.0 | -1.650643e+01 | -9.771196e+00 | 9.5e+00 | 2.6e+01 | 8.8e+01 | 2.69e+01 | 5.0e+01 | 6.0e+01 | 42 |
| fr | 2003_11 | 1um3:E | 4.1 | 3.3 | 2.338244e+01 | 3.066180e+01 | 9.1e+01 | 9.4e+01 | 9.4e+01 | 2.58e+01 | 8.4e+01 | 8.4e+01 | 32 |
| fr | 2003_11 | 1um3:F | 2.9 | 3.5 | 2.177701e+01 | 2.301050e+01 | 7.0e+01 | 7.3e+01 | 7.3e+01 | 7.02e+01 | 7.3e+01 | 7.3e+01 | 33 |
| fr | 2003_11 | 1unn:C | 3.8 | 2.8 | -6.108000e+00 | -2.644397e-01 | 3.6e+00 | 9.0e+00 | 9.0e+01 | 2.92e+00 | 2.8e+01 | 3.7e+01 | 111 |
| fr | 2003_11 | THIS_month:psum | 7.0 | 3.3 | 11.0 | 14.8 | 32.9 | 41.5 | 91.2 | 14.4 | 52.6 | 58.7 | 106.0 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |