| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2003_10 | THIS_month:psum | 0.4 | 0.6 | 2.3 | 5.6 | 39.5 | 45.3 | 9 | 9.5 | 69.5 | ||
| fr | 2003_10 | 1upt:B | 0.4 | 0 | -2.181429e+01 | -1.122146e+01 | 0.0e+00 | 1.9e+00 | 5.2e+01 | 82 | 0.0e+00 | 0.0e+00 | 54 |
| fr | 2003_10 | 1uqv:A | 0.4 | 1.2 | -2.655652e+01 | -7.183280e+00 | 4.7e+00 | 9.4e+00 | 2.7e+01 | 8.6 | 1.8e+01 | 1.9e+01 | 85 |
| fr | 2003_10 | THIS_month:psum | 0.4 | 0.6 | 2.3 | 5.6 | 39.5 | 45.3 | 9 | 9.5 | 69.5 | ||
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |