| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2003_07 | THIS_month:psum | 2.0 | 2.0 | 2.4 | 9.0 | 12.6 | 39.5 | 7.1 | 17.6 | 21.5 | 169.4 | |
| fr | 2003_07 | 1iwm:A | 0.6 | 2.0 | -1.090556e+01 | -2.582495e+00 | 1.1e+00 | 2.3e+00 | 3.2e+01 | 0.37 | 1.0e+01 | 1.4e+01 | 177 |
| fr | 2003_07 | 1j1d:B | 2.9 | 3.1 | -8.852174e+00 | 2.438951e+00 | 4.3e+00 | 1.0e+01 | 9.9e+01 | 2e-18 | 3.9e+01 | 4.7e+01 | 70 |
| fr | 2003_07 | 1n0z:A | 1.2 | 0.7 | -2.349231e+01 | -1.356716e+01 | 1.8e+01 | 2.7e+01 | 5.8e+01 | 42 | 2.4e+01 | 3.3e+01 | 45 |
| fr | 2003_07 | 1ng7:A | 1.0 | 2.3 | -2.717360e+01 | -9.057799e+00 | 2.8e+01 | 3.2e+01 | 3.3e+01 | 0.74 | 2.7e+01 | 3.0e+01 | 60 |
| fr | 2003_07 | 1oe4:A | 3.4 | 1.6 | -2.106113e+01 | -2.448188e+00 | 8.6e+00 | 1.0e+01 | 1.2e+01 | 3.8 | 4.9e+00 | 6.1e+00 | 245 |
| fr | 2003_07 | 1p5h:A | 3.7 | 2.3 | -9.815185e+00 | -4.130942e-01 | 1.4e+00 | 2.8e+00 | 1.5e+01 | 1.8 | 6.3e+00 | 7.7e+00 | 427 |
| fr | 2003_07 | 1pbu:A | 1.4 | 2.3 | -1.327826e+01 | -2.177177e+00 | 1.9e+00 | 4.3e+00 | 2.8e+01 | 1.5 | 1.2e+01 | 1.3e+01 | 162 |
| fr | 2003_07 | THIS_month:psum | 2.0 | 2.0 | 2.4 | 9.0 | 12.6 | 39.5 | 7.1 | 17.6 | 21.5 | 169.4 | |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |