| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2003_07 | THIS_month:psum | 7.6 | 3.0 | 9.8 | 7.3 | 16.7 | 24.5 | 81.7 | 9.1 | 39.5 | 45.1 | 181.5 |
| fr | 2003_07 | 1iwl:A | 4.2 | 2.3 | -5.220256e+00 | -8.093512e-01 | 2.3e+00 | 6.2e+00 | 6.6e+01 | 6.49e+00 | 2.0e+01 | 2.8e+01 | 177 |
| fr | 2003_07 | 1iwm:A | 3.3 | 3.3 | -3.246630e+00 | 7.956547e-01 | 1.7e+00 | 2.8e+00 | 6.7e+01 | 2.60e+00 | 2.0e+01 | 2.7e+01 | 177 |
| fr | 2003_07 | 1j1d:B | 6.8 | 3.7 | -8.852174e+00 | 2.182180e+01 | 5.7e+00 | 1.7e+01 | 9.9e+01 | 1.35e-04 | 6.6e+01 | 6.7e+01 | 70 |
| fr | 2003_07 | 1n0z:A | 3.5 | 2.6 | 2.088284e+01 | -8.369332e+00 | 5.6e+01 | 6.0e+01 | 8.9e+01 | 1.74e+01 | 5.8e+01 | 6.0e+01 | 45 |
| fr | 2003_07 | 1ng7:A | 3.1 | 2.3 | -5.762614e+00 | -3.083366e+00 | 1.5e+01 | 2.0e+01 | 8.8e+01 | 2.33e+01 | 3.3e+01 | 4.5e+01 | 60 |
| fr | 2003_07 | 1njh:A | 3.6 | 2.3 | -3.405580e+00 | 3.164453e+00 | 8.6e+00 | 1.6e+01 | 8.3e+01 | 9.91e+00 | 3.6e+01 | 4.2e+01 | 105 |
| fr | 2003_07 | 1oe4:A | 13.7 | 3.1 | -3.169647e+00 | 7.172367e+00 | 2.8e+01 | 3.9e+01 | 7.8e+01 | 5.39e-02 | 4.4e+01 | 5.0e+01 | 245 |
| fr | 2003_07 | 1of5:B | 12.3 | 4.2 | -6.017115e+00 | 1.700259e+01 | 4.9e+01 | 6.4e+01 | 7.3e+01 | 7.19e-01 | 6.6e+01 | 6.8e+01 | 128 |
| fr | 2003_07 | 1ogs:A | 24.0 | 4.7 | 7.200421e+00 | 7.387153e+00 | 2.1e+01 | 3.4e+01 | 6.4e+01 | 9.94e-02 | 4.2e+01 | 4.7e+01 | 497 |
| fr | 2003_07 | 1p4q:A | 1.2 | 2.6 | -1.210202e+01 | -1.148252e+01 | 9.6e+00 | 1.3e+01 | 8.3e+01 | 6.15e+01 | 2.9e+01 | 3.5e+01 | 52 |
| fr | 2003_07 | 1p5h:A | 3.1 | 2.0 | 1.576577e+00 | 8.183478e-01 | 1.4e+00 | 4.0e+00 | 8.2e+01 | 1.01e-01 | 1.2e+01 | 1.5e+01 | 427 |
| fr | 2003_07 | 1pbu:A | 4.4 | 3.1 | -4.847619e+00 | 2.235130e+00 | 8.6e+00 | 1.4e+01 | 7.8e+01 | 3.12e-01 | 2.3e+01 | 3.1e+01 | 162 |
| fr | 2003_07 | 1pqs:A | 8.3 | 3.3 | -7.932468e+00 | 6.869333e+00 | 1.8e+01 | 3.1e+01 | 1.0e+02 | 5.19e+00 | 6.9e+01 | 7.1e+01 | 77 |
| fr | 2003_07 | 1psw:A | 15.6 | 3.3 | -1.269273e+00 | 6.159546e+00 | 9.7e+00 | 2.3e+01 | 9.4e+01 | 5.31e-03 | 3.5e+01 | 4.6e+01 | 319 |
| fr | 2003_07 | THIS_month:psum | 7.6 | 3.0 | 9.8 | 7.3 | 16.7 | 24.5 | 81.7 | 9.1 | 39.5 | 45.1 | 181.5 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |