| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2003_07 | THIS_month:psum | 5.7 | 2.4 | 9.8 | 5.5 | 12.1 | 19.0 | 76.5 | 9.1 | 28.2 | 34.9 | 181.5 |
| fr | 2003_07 | 1iwl:A | 1.0 | 0.7 | -5.220256e+00 | -2.888346e+00 | 1.7e+00 | 4.5e+00 | 6.6e+01 | 6.49e+00 | 1.1e+01 | 1.9e+01 | 177 |
| fr | 2003_07 | 1iwm:A | 1.5 | 2.3 | -5.598361e+00 | -2.005655e-01 | 5.6e-01 | 5.6e-01 | 6.1e+01 | 2.60e+00 | 1.3e+01 | 1.8e+01 | 177 |
| fr | 2003_07 | 1j1d:B | 3.7 | 3.1 | -8.852174e+00 | 2.438951e+00 | 4.3e+00 | 1.1e+01 | 9.9e+01 | 1.35e-04 | 3.9e+01 | 4.7e+01 | 70 |
| fr | 2003_07 | 1n0z:A | 3.5 | 2.6 | 2.088284e+01 | -1.357126e+01 | 5.6e+01 | 6.0e+01 | 6.9e+01 | 1.74e+01 | 5.8e+01 | 6.0e+01 | 45 |
| fr | 2003_07 | 1ng7:A | 1.6 | 0.0 | -1.288741e+01 | -1.017041e+01 | 5.0e+00 | 1.3e+01 | 7.7e+01 | 2.33e+01 | 1.5e+01 | 2.8e+01 | 60 |
| fr | 2003_07 | 1njh:A | 3.6 | 2.0 | -8.224748e+00 | 1.510319e-02 | 1.9e+00 | 3.8e+00 | 7.0e+01 | 9.91e+00 | 1.1e+01 | 2.1e+01 | 105 |
| fr | 2003_07 | 1oe4:A | 11.6 | 2.0 | -3.185050e+00 | 5.029380e+00 | 1.4e+01 | 2.1e+01 | 7.8e+01 | 5.39e-02 | 2.7e+01 | 4.7e+01 | 245 |
| fr | 2003_07 | 1of5:B | 12.3 | 4.2 | -6.567689e+00 | 1.700259e+01 | 4.9e+01 | 6.4e+01 | 7.3e+01 | 7.19e-01 | 6.6e+01 | 6.8e+01 | 128 |
| fr | 2003_07 | 1ogs:A | 24.0 | 4.7 | 7.200421e+00 | 7.387153e+00 | 2.1e+01 | 3.4e+01 | 6.3e+01 | 9.94e-02 | 4.2e+01 | 4.7e+01 | 497 |
| fr | 2003_07 | 1p4q:A | 0.7 | 2.3 | -1.796468e+01 | -1.164604e+01 | 3.8e+00 | 7.7e+00 | 6.5e+01 | 6.15e+01 | 2.3e+01 | 2.7e+01 | 52 |
| fr | 2003_07 | 1p5h:A | 1.5 | 1.6 | 1.576577e+00 | 8.183478e-01 | 9.4e-01 | 1.6e+00 | 8.2e+01 | 1.01e-01 | 7.0e+00 | 9.4e+00 | 427 |
| fr | 2003_07 | 1pbu:A | 3.8 | 3.1 | -4.886400e+00 | -3.057441e+00 | 1.2e+00 | 1.9e+00 | 7.7e+01 | 3.12e-01 | 1.2e+01 | 1.4e+01 | 162 |
| fr | 2003_07 | 1pqs:A | 0.7 | 2.6 | -7.932468e+00 | -4.775312e-02 | 9.1e+00 | 3.1e+01 | 1.0e+02 | 5.19e+00 | 3.8e+01 | 4.4e+01 | 77 |
| fr | 2003_07 | 1psw:A | 11.0 | 2.6 | -1.269273e+00 | 6.159546e+00 | 2.2e+00 | 1.2e+01 | 9.1e+01 | 5.31e-03 | 3.4e+01 | 4.0e+01 | 319 |
| fr | 2003_07 | THIS_month:psum | 5.7 | 2.4 | 9.8 | 5.5 | 12.1 | 19.0 | 76.5 | 9.1 | 28.2 | 34.9 | 181.5 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |