| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2003_06 | THIS_month:psum | 1.8 | 1.7 | 5.8 | 12.2 | 19.2 | 46.9 | 59 | 27.6 | 31.2 | 116.5 | |
| fr | 2003_06 | 1iyc:A | 1.6 | 1.6 | -2.106207e+01 | -1.882498e+00 | 0.0e+00 | 0.0e+00 | 9.7e+00 | 37 | 5.4e+00 | 7.0e+00 | 299 |
| fr | 2003_06 | 1j2m:A | 3.5 | 2.8 | 5.804295e+00 | -2.617677e+00 | 1.5e+01 | 2.6e+01 | 3.7e+01 | 2.0 | 2.6e+01 | 2.8e+01 | 99 |
| fr | 2003_06 | 1ju8:A | 0.4 | 0.7 | -2.181429e+01 | -1.650811e+01 | 8.1e+00 | 1.6e+01 | 7.6e+01 | 20 | 2.7e+01 | 3.8e+01 | 37 |
| fr | 2003_06 | 1k0p:A | 1.8 | 2.0 | -3.046824e+01 | -1.962474e+01 | 2.6e+01 | 3.5e+01 | 6.5e+01 | 177 | 5.2e+01 | 5.2e+01 | 31 |
| fr | 2003_06 | THIS_month:psum | 1.8 | 1.7 | 5.8 | 12.2 | 19.2 | 46.9 | 59 | 27.6 | 31.2 | 116.5 | |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |