| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2003_06 | THIS_month:psum | 1.2 | 1.6 | 9.8 | 16 | 36.6 | 59 | 20.5 | 21.5 | 116.5 | ||
| fr | 2003_06 | 1iyc:A | 0.3 | 1.6 | -2.106207e+01 | -2.000135e+00 | 0.0e+00 | 0.0e+00 | 9.7e+00 | 37 | 5.0e+00 | 6.0e+00 | 299 |
| fr | 2003_06 | 1j2m:A | 2.8 | 2.8 | -1.630034e+01 | -3.561526e+00 | 8.1e+00 | 1.3e+01 | 3.7e+01 | 2.0 | 2.5e+01 | 2.8e+01 | 99 |
| fr | 2003_06 | 1ju8:A | -0.0 | 0 | -4.698462e+01 | -1.650811e+01 | 5.4e+00 | 1.6e+01 | 3.5e+01 | 20 | 0.0e+00 | 0.0e+00 | 37 |
| fr | 2003_06 | 1k0p:A | 1.8 | 2.0 | -3.046824e+01 | -1.962474e+01 | 2.6e+01 | 3.5e+01 | 6.5e+01 | 177 | 5.2e+01 | 5.2e+01 | 31 |
| fr | 2003_06 | THIS_month:psum | 1.2 | 1.6 | 9.8 | 16 | 36.6 | 59 | 20.5 | 21.5 | 116.5 | ||
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |