| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2003_06 | THIS_month:psum | 5.2 | 2.5 | 5.5 | 7.3 | 23.5 | 35.8 | 88.5 | 13.4 | 42.1 | 50.8 | 120.1 |
| fr | 2003_06 | 1iyc:A | 1.1 | 1.6 | -1.796471e+01 | -1.568837e+01 | 1.1e+01 | 3.3e+01 | 9.4e+01 | 1.90e+01 | 5.6e+01 | 5.6e+01 | 36 |
| fr | 2003_06 | 1j2m:A | 11.4 | 4.1 | 9.162509e+00 | 7.939793e+00 | 4.7e+01 | 6.6e+01 | 8.6e+01 | 3.91e-08 | 5.8e+01 | 6.2e+01 | 99 |
| fr | 2003_06 | 1ju8:A | 4.7 | 2.3 | -1.357718e+01 | 2.420006e+00 | 4.9e+01 | 6.5e+01 | 1.0e+02 | 3.39e+01 | 7.3e+01 | 7.8e+01 | 37 |
| fr | 2003_06 | 1k0p:A | 1.1 | 1.2 | -2.035998e+01 | -1.970137e+01 | 1.6e+01 | 3.5e+01 | 9.7e+01 | 6.10e+01 | 3.9e+01 | 4.8e+01 | 31 |
| fr | 2003_06 | 1lkn:A | 5.5 | 3.1 | -7.158518e+00 | -3.209973e+00 | 1.5e+01 | 3.1e+01 | 9.3e+01 | 1.42e+01 | 3.0e+01 | 4.0e+01 | 89 |
| fr | 2003_06 | 1lx8:A | 2.5 | 2.0 | -1.342657e+00 | 3.060466e+00 | 2.7e+01 | 2.9e+01 | 1.0e+02 | 1.52e+01 | 3.8e+01 | 4.5e+01 | 55 |
| fr | 2003_06 | 1mn3:A | 4.4 | 2.3 | -1.174615e+01 | 1.356760e+01 | 2.1e+01 | 4.8e+01 | 1.0e+02 | 3.18e+01 | 5.0e+01 | 6.9e+01 | 52 |
| fr | 2003_06 | 1n7z:A | 1.4 | 1.6 | -2.726710e+00 | -1.706346e-01 | 9.5e-01 | 1.3e+00 | 7.1e+01 | 6.95e-01 | 1.2e+01 | 1.7e+01 | 316 |
| fr | 2003_06 | 1nu3:A | 16.2 | 5.0 | -5.103601e+00 | 1.868927e+01 | 6.7e+01 | 7.8e+01 | 8.4e+01 | 1.04e-02 | 7.2e+01 | 7.7e+01 | 141 |
| fr | 2003_06 | 1nvh:A | 3.9 | 2.8 | 5.487333e+00 | 1.632555e+00 | 1.8e+01 | 4.0e+01 | 9.0e+01 | 5.11e+00 | 3.8e+01 | 4.5e+01 | 60 |
| fr | 2003_06 | 1nwj:A | 5.7 | 3.3 | 1.997601e+00 | 9.886903e-01 | 1.8e+01 | 2.9e+01 | 8.5e+01 | 5.15e+00 | 4.1e+01 | 5.4e+01 | 112 |
| fr | 2003_06 | 1oc0:B | 0.9 | 1.6 | -1.696667e+01 | -1.536995e+01 | 2.2e+01 | 2.7e+01 | 9.7e+01 | 2.12e+01 | 4.1e+01 | 6.2e+01 | 37 |
| fr | 2003_06 | 1oft:A | 16.0 | 4.1 | -5.291459e+00 | 1.852891e+01 | 6.2e+01 | 7.5e+01 | 9.7e+01 | 5.15e-01 | 8.0e+01 | 8.6e+01 | 119 |
| fr | 2003_06 | 1oi1:A | 2.8 | 2.6 | -5.929758e+00 | -1.180973e+00 | 9.7e-01 | 4.8e+00 | 5.0e+01 | 4.14e+00 | 1.8e+01 | 2.1e+01 | 207 |
| fr | 2003_06 | 1oi2:A | 3.8 | 2.3 | -1.196325e+00 | 1.369066e+00 | 3.9e+00 | 9.5e+00 | 8.8e+01 | 3.94e+00 | 2.3e+01 | 2.6e+01 | 336 |
| fr | 2003_06 | 1otr:A | 1.0 | 2.0 | -1.034513e+01 | -1.100329e+01 | 8.2e+00 | 2.2e+01 | 1.0e+02 | 1.20e+01 | 2.9e+01 | 5.7e+01 | 49 |
| fr | 2003_06 | 1p42:A | 7.6 | 2.0 | -3.130342e+00 | 5.171861e+00 | 1.3e+01 | 1.5e+01 | 7.3e+01 | 1.26e+00 | 1.8e+01 | 2.2e+01 | 267 |
| fr | 2003_06 | THIS_month:psum | 5.2 | 2.5 | 5.5 | 7.3 | 23.5 | 35.8 | 88.5 | 13.4 | 42.1 | 50.8 | 120.1 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |