| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2003_06 | THIS_month:psum | 3.5 | 1.9 | 9.1 | 6.1 | 13.0 | 24.7 | 78.8 | 13.4 | 32.9 | 41 | 120.1 |
| fr | 2003_06 | 1iyc:A | 1.1 | 1.2 | -1.868740e+01 | -1.696159e+01 | 5.6e+00 | 2.2e+01 | 8.9e+01 | 1.90e+01 | 5.6e+01 | 5.6e+01 | 36 |
| fr | 2003_06 | 1j2m:A | 11.4 | 4.1 | 9.162509e+00 | 7.939793e+00 | 4.7e+01 | 6.6e+01 | 8.6e+01 | 3.91e-08 | 5.8e+01 | 6.2e+01 | 99 |
| fr | 2003_06 | 1ju8:A | 3.9 | 2.3 | -1.410899e+01 | -6.757228e+00 | 3.5e+01 | 6.5e+01 | 9.2e+01 | 3.39e+01 | 6.5e+01 | 7.8e+01 | 37 |
| fr | 2003_06 | 1k0p:A | 0.2 | 1.2 | -2.106207e+01 | -1.970323e+01 | 1.3e+01 | 3.5e+01 | 9.4e+01 | 6.10e+01 | 3.9e+01 | 4.5e+01 | 31 |
| fr | 2003_06 | 1lkn:A | 5.5 | 3.1 | -8.735744e+00 | -3.957689e+00 | 1.5e+01 | 3.1e+01 | 6.5e+01 | 1.42e+01 | 2.7e+01 | 3.7e+01 | 89 |
| fr | 2003_06 | 1lx8:A | 0.5 | 2.0 | -7.932295e+00 | -7.505330e+00 | 7.3e+00 | 2.0e+01 | 1.0e+02 | 1.52e+01 | 1.8e+01 | 3.6e+01 | 55 |
| fr | 2003_06 | 1mn3:A | 1.2 | 0.7 | -1.221600e+01 | -1.174505e+01 | 9.6e+00 | 2.5e+01 | 9.6e+01 | 3.18e+01 | 3.3e+01 | 3.8e+01 | 52 |
| fr | 2003_06 | 1n7z:A | 0.6 | 1.6 | -2.726710e+00 | -1.706346e-01 | 9.5e-01 | 1.3e+00 | 7.1e+01 | 6.95e-01 | 1.2e+01 | 1.7e+01 | 316 |
| fr | 2003_06 | 1nu3:A | 15.0 | 4.4 | -5.219658e+00 | 1.660830e+01 | 5.0e+01 | 6.2e+01 | 8.2e+01 | 1.04e-02 | 7.0e+01 | 7.4e+01 | 141 |
| fr | 2003_06 | 1nvh:A | 3.1 | 0.7 | -2.475453e+00 | -1.650293e+00 | 5.0e+00 | 1.3e+01 | 6.7e+01 | 5.11e+00 | 2.5e+01 | 3.7e+01 | 60 |
| fr | 2003_06 | 1nwj:A | 4.4 | 2.3 | -3.003579e+00 | -2.305401e+00 | 2.7e+00 | 9.8e+00 | 6.6e+01 | 5.15e+00 | 3.6e+01 | 3.9e+01 | 112 |
| fr | 2003_06 | 1oc0:B | 0.9 | 1.2 | -1.970323e+01 | -1.650746e+01 | 8.1e+00 | 1.4e+01 | 8.4e+01 | 2.12e+01 | 1.9e+01 | 2.4e+01 | 37 |
| fr | 2003_06 | 1oft:A | 6.9 | 3.3 | -5.926465e+00 | 3.520362e+00 | 1.1e+01 | 2.6e+01 | 8.7e+01 | 5.15e-01 | 3.4e+01 | 4.5e+01 | 119 |
| fr | 2003_06 | 1oi1:A | 0.5 | 0.7 | -7.517833e+00 | -2.703823e+00 | 4.8e-01 | 9.7e-01 | 3.9e+01 | 4.14e+00 | 1.1e+01 | 1.5e+01 | 207 |
| fr | 2003_06 | 1oi2:A | 3.6 | 2.3 | -2.599677e+00 | 1.054054e+00 | 3.9e+00 | 5.4e+00 | 6.7e+01 | 3.94e+00 | 2.3e+01 | 2.6e+01 | 336 |
| fr | 2003_06 | 1otr:A | 1.0 | 0.7 | -1.034513e+01 | -1.117192e+01 | 6.1e+00 | 2.2e+01 | 1.0e+02 | 1.20e+01 | 2.4e+01 | 5.7e+01 | 49 |
| fr | 2003_06 | 1p42:A | 0.8 | 1.6 | -3.615236e+00 | 1.466630e+00 | 1.5e+00 | 2.2e+00 | 5.6e+01 | 1.26e+00 | 9.4e+00 | 1.1e+01 | 267 |
| fr | 2003_06 | THIS_month:psum | 3.5 | 1.9 | 9.1 | 6.1 | 13.0 | 24.7 | 78.8 | 13.4 | 32.9 | 41 | 120.1 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |